Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1508 |
Symbol | |
ID | 4183986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1739268 |
End bp | 1739921 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638071501 |
Product | hypothetical protein |
Protein accession | YP_678119 |
Protein GI | 110637912 |
COG category | [S] Function unknown |
COG ID | [COG3544] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000100839 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.123657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAA AGAACACACT TGTCAAAACT ATCTTGGCAT CCGTAATCGT TACCGCAATT ATATCTCTAT CTTCTTGTAA AAAGGATGAT CCAGCCGAGC CGAGTGGATT AAAGGTTCAA GCCCATAATG ATAATGAGAT GATGAAAATA ATGCACAAAA TGTCTCATAG CATGGATACG ATGACCAAAA TGAATAATGT AGATCATGAT TTTGCAATGA TGATGAAAAT GCATCACCAA GGTGCATTGG ATATGGCAAA TTACGAATTG GTACATGGTG ATAATCCTGC AATGAAAACA AAAGCAAATC AGATAATATC TGCACAAACG GCTGAAATTG CAGAGTTGAA TGCATTTCTG AACAATCACA TGGATATGGA TAATACAAAC TCAACTGAAT ATAATATGGT TGTTATGGCC TCCATGGAAA AAATGGCAAA AGGGGCTGAT CTTGAAGTTA TCACTGGCGA CTCGGACAAT GATTTTGCTG CACTTATGAT TACACATCAT CAAAGTGCTA CTGAAATGGC TCAGGCACAA ATAGACTACG GTAAGGACGC AGATTTAAAG GAAATGGCAA AAAAAATGAT TAAAGATCAA GAAATGGAAA TTTCTGAGTT TCAGGATTGG TTATTAAATA ATAAGCCTTA TTAA
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Protein sequence | MKSKNTLVKT ILASVIVTAI ISLSSCKKDD PAEPSGLKVQ AHNDNEMMKI MHKMSHSMDT MTKMNNVDHD FAMMMKMHHQ GALDMANYEL VHGDNPAMKT KANQIISAQT AEIAELNAFL NNHMDMDNTN STEYNMVVMA SMEKMAKGAD LEVITGDSDN DFAALMITHH QSATEMAQAQ IDYGKDADLK EMAKKMIKDQ EMEISEFQDW LLNNKPY
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