Gene CHU_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1508 
Symbol 
ID4183986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1739268 
End bp1739921 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content36% 
IMG OID638071501 
Producthypothetical protein 
Protein accessionYP_678119 
Protein GI110637912 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000100839 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.123657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA AGAACACACT TGTCAAAACT ATCTTGGCAT CCGTAATCGT TACCGCAATT 
ATATCTCTAT CTTCTTGTAA AAAGGATGAT CCAGCCGAGC CGAGTGGATT AAAGGTTCAA
GCCCATAATG ATAATGAGAT GATGAAAATA ATGCACAAAA TGTCTCATAG CATGGATACG
ATGACCAAAA TGAATAATGT AGATCATGAT TTTGCAATGA TGATGAAAAT GCATCACCAA
GGTGCATTGG ATATGGCAAA TTACGAATTG GTACATGGTG ATAATCCTGC AATGAAAACA
AAAGCAAATC AGATAATATC TGCACAAACG GCTGAAATTG CAGAGTTGAA TGCATTTCTG
AACAATCACA TGGATATGGA TAATACAAAC TCAACTGAAT ATAATATGGT TGTTATGGCC
TCCATGGAAA AAATGGCAAA AGGGGCTGAT CTTGAAGTTA TCACTGGCGA CTCGGACAAT
GATTTTGCTG CACTTATGAT TACACATCAT CAAAGTGCTA CTGAAATGGC TCAGGCACAA
ATAGACTACG GTAAGGACGC AGATTTAAAG GAAATGGCAA AAAAAATGAT TAAAGATCAA
GAAATGGAAA TTTCTGAGTT TCAGGATTGG TTATTAAATA ATAAGCCTTA TTAA
 
Protein sequence
MKSKNTLVKT ILASVIVTAI ISLSSCKKDD PAEPSGLKVQ AHNDNEMMKI MHKMSHSMDT 
MTKMNNVDHD FAMMMKMHHQ GALDMANYEL VHGDNPAMKT KANQIISAQT AEIAELNAFL
NNHMDMDNTN STEYNMVVMA SMEKMAKGAD LEVITGDSDN DFAALMITHH QSATEMAQAQ
IDYGKDADLK EMAKKMIKDQ EMEISEFQDW LLNNKPY