Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1504 |
Symbol | cusA |
ID | 4183982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1734134 |
End bp | 1737283 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638071497 |
Product | heavy metal efflux pump protein |
Protein accession | YP_678115 |
Protein GI | 110637908 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0325139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.186965 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAACA AACTTATTTC CTTTTCCATC AGAAACCGCT TTATCGTTCT GTTCATCGCA GTAGGTGTCT TTGCATGGGG TATTTTATCC ATCACAAAAA ATCCCATTGA TGCTATTCCA GACCTTTCTG AAAATCAGGT AATCGTATTC ACTGAATGGA TGGGACGTAG CCCACAGGTA ATCGAAGATC AGATTACGTA TCCTTTGGTT TCAAACCTAC AAGGAATTCC AAAAATTAAA AATGTACGCG GAACTTCAAT GTTCGGGATG AGTTTTGTTT ACATCATTTT TGAAGACGAT GTAGATATTT ATTGGGCTAG AACCAGAGTA CTTGAGCGGC TTAATTATGC ACAGCGACTA TTACCCCAAG GCATCACTCC TACTCTAGGA CCTGATGGAA CAGGCGTAGG ACATGTATTC TGGTATTATT TAGACGCTAA AAATATTGAT TTAGGAGAAC AGCGTGCCTT ACAGGATTGG TATATCAAAT TTGGCTTACA GACTGTGAAA GGTGTAAGTG AAGTAGCATC TTTTGGTGGC TTTCAAAAAC AATATCAGAT TAACATTGAT CCAAATAAAC TTACTTATTA CAATCTCACT TTAATGGATG TCCTCAAGGC TGTAAAAGTC AACAACAATG ATGTTGGAGG CAGAAAGTTT GAGATGAGTG ATATGAGCTA TATCGTTCGT GGATTAGGGT ACATTAAAAA AATTGAAGAC GTAGAAAATG TACCTGTTTC AACAAATAAC ACCATACCGA TTCGCATCAA AGATATAGCC ACCGTGCAAA TGGGCGGTGA TATTCGATTA GGGATATTTG ACAATAATGG TGAAGGCGAA GTTGTCGGAG GGATTGTAGT TATGCGCTAT GGAGAGAATG CAGATAATGT TATTAAAGAT GTAAAAGCTA AATTAAAAGA TATTGAAAAA GGCCTACCCG AAGGTGTAAC CATTAAAGTT GCATATGACA GAAGTACGTT GATTGAAGAA GCAATTAGCT CTATTAAGCA TACCTTAGGA GAAGAAATTA TTACAGTTTC TTTAGTAGTC ATTATATTTT TGCTTAGCTG GAAAAGTGCT TTCAGTATTA TTATTCAAAT ACCCATTACT ATTGCAGCAA GTTTTATTCT GCTGAATATG TTTGGTATTT CCTCCAACAT CATGTCTCTT ACAGGGATAG CGCTAGCTAT TGGTGTTATT GTAGATAACG GAATAGTCAT GGCAGAGAAC TGCCATCGAA ATTTATCTCT CAAAGTTTAT GATGAGCAAG ATCGCCTGAA TATTATTGAA AAATCCTGTA AACAGGTAGG CCGAGGAATT TTCTTTTCAA CCATTATTAT TATTGCTTCT TTCTTACCCG TATTTATGCT TTCAGGACAA GAGGGGAAAT TATTTCATCC ATTAGCATGG ACAAAAACAT TTATACTTTT AGTGGATGCC ATTTTGGCTG TTACACTGGC ACCTGTACTG ATTTCATTTT TCATGAAAGG TAAACTAAGG CCTGAATCCA GTAATCCAAT AAACAGATGG CTTGAGAAAA TATATACTCC TATTATCACA TGGTGCTTAA CATGGAGAAA AACGACTCTT GGAATTAACA TATTGGCTTT ACTTATTAGC ATCCCATTAT TGATGAGCCT TGGCAAAGAG TTTATGCCAC CGCTTGATGA AGGTTCTATA TTATTCATGC CTGTAACATT ACCAGATGTT TCTAATTCAG AGGTCAAAAG GATATTACAA ATTCAAGACA AAATTATTAA ATCTGTACCT GAAGTTGAAT CTGTATTAGG GAAAGCAGGA AGAGCAAATA CTGCTACAGA TAACTCTCCT ATTAGTATGA TTGAAACCAT TGTGTTATTA AAACCAAAAT CTGAATGGAG AGCAGGTATA AAAAAAGAAG ACATTATTAA CGAATTGAAT GCAAAGCTTC AGATCCCTGG TGTGGTGAAT GGATGGACAC AGCCCATCAT TAACCGTATT AATATGTTAT CTACGGGTAT CCGCACAGAT GTTGGATTAA AAGTATATGG ACAGAATCTG GATTCCATTA ATGCCTTCTC TCAAATGTTA AAAAAAGAAT TAGAGGGAAT TGAAGGTGTT AAAGATTTGT ATGTAGAACC AATCACAGGT GGTAAGTATT TAGATATCAC TATAAAGAAA CAAGAGATCG GACGATATGG ACTAACTGAA GATGATATTA ATATGATAGT TGAATCTGCC TTAGGTGGAA TGAATTTAAC TACTACTATT GAGGGCAGGC AGCGATTTAA TGTAAATGCG AGATTTGCAC AGGACTACCG CAATAGCATC GAGAAAATAA AAAGGACTCC AGTGCAAACA ATGAATTATG GCACCATTCC ATTGTCAGCT GTAGCAGATA TAACTCTATC TGAAGGTCCT CCTATGATCA ACTCTGAAAA TGCGATGTTA CGTGGAACAA TACTTTTCAA CGTACGGGAT AGAGACCTTG GAAGTACTGT AGACGAAGCA ATGAAAAAAT TAAATAATAA AATCAGTAAG CTACCAAAAG GTTATTTTAT TGAATGGAGC GGTCAATATG AAAATTTGAT TCGGGCGGAA AGAACATTGC TCATTATAAT ACCTGTAGTA TTGGTTATCA TTTTCTTTGC TCTTTATCTA GCCTTCCATT CACTACGAGA AGCATTTCTA AGTCTGTTAA CCATTCCATT TGCTTTGATT GGTGGGGCTT ATATGATTTA TTTTTATCAG GTTAATTTAT CTGTAGCTGT AATGGTCGGA TTCATTGCTT TGTTTGGAAT TGCCGTTGAA ACAGGTATTA TAATGGTTAT TTATTTAAAT GATGCCATGC ATCAACTGGT ACTCAAAAAG AAAGAGCTAA ATGAATCCAT AACCAATGAA GATATTCGCG AATATGTTAT TAATGGGGCA GCTAAACGCT TGCGACCTAA ATTAATGACT GTATCCGTTG CACTATTTGG CTTAGTACCT GTATTATGGT CTTCAGGTGT AGGAAGCGAT GTGATGCTTC CAATCGTACT GCCAATGATT GGCGGAGTCC TTACCTCTTC TACTCATATA CTTCTTGTAA CGCCATTGAT CTTTGAGATG ACAAAAGAAT ACGAATTAAG AAAATTTGGA AAAATAGATG TATTGGAAGT AGAACATTAA
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Protein sequence | MVNKLISFSI RNRFIVLFIA VGVFAWGILS ITKNPIDAIP DLSENQVIVF TEWMGRSPQV IEDQITYPLV SNLQGIPKIK NVRGTSMFGM SFVYIIFEDD VDIYWARTRV LERLNYAQRL LPQGITPTLG PDGTGVGHVF WYYLDAKNID LGEQRALQDW YIKFGLQTVK GVSEVASFGG FQKQYQINID PNKLTYYNLT LMDVLKAVKV NNNDVGGRKF EMSDMSYIVR GLGYIKKIED VENVPVSTNN TIPIRIKDIA TVQMGGDIRL GIFDNNGEGE VVGGIVVMRY GENADNVIKD VKAKLKDIEK GLPEGVTIKV AYDRSTLIEE AISSIKHTLG EEIITVSLVV IIFLLSWKSA FSIIIQIPIT IAASFILLNM FGISSNIMSL TGIALAIGVI VDNGIVMAEN CHRNLSLKVY DEQDRLNIIE KSCKQVGRGI FFSTIIIIAS FLPVFMLSGQ EGKLFHPLAW TKTFILLVDA ILAVTLAPVL ISFFMKGKLR PESSNPINRW LEKIYTPIIT WCLTWRKTTL GINILALLIS IPLLMSLGKE FMPPLDEGSI LFMPVTLPDV SNSEVKRILQ IQDKIIKSVP EVESVLGKAG RANTATDNSP ISMIETIVLL KPKSEWRAGI KKEDIINELN AKLQIPGVVN GWTQPIINRI NMLSTGIRTD VGLKVYGQNL DSINAFSQML KKELEGIEGV KDLYVEPITG GKYLDITIKK QEIGRYGLTE DDINMIVESA LGGMNLTTTI EGRQRFNVNA RFAQDYRNSI EKIKRTPVQT MNYGTIPLSA VADITLSEGP PMINSENAML RGTILFNVRD RDLGSTVDEA MKKLNNKISK LPKGYFIEWS GQYENLIRAE RTLLIIIPVV LVIIFFALYL AFHSLREAFL SLLTIPFALI GGAYMIYFYQ VNLSVAVMVG FIALFGIAVE TGIIMVIYLN DAMHQLVLKK KELNESITNE DIREYVINGA AKRLRPKLMT VSVALFGLVP VLWSSGVGSD VMLPIVLPMI GGVLTSSTHI LLVTPLIFEM TKEYELRKFG KIDVLEVEH
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