Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1501 |
Symbol | cusB |
ID | 4185398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1730348 |
End bp | 1731562 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638071494 |
Product | component of copper transport system |
Protein accession | YP_678112 |
Protein GI | 110637905 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000252405 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0292911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTAC ATATGAAAAA TATAGTATTA GGCTTAACGC TTCTGATAGT AGCATGGTCA TGTAACAAAG AATCCGGAAA AAATACTCCT GACAATGTAT TCTATACATG TTCAATGGAT CCTCAGGTCA TGGAGAAGAA ACCTGGAAAA TGTCCGATTT GTAAAATGGA TCTTACAAAA GTTATTATTG ACAAAAATGA TATGCAAAGC GGATTGAAAT TAAATAACGA ACAGGAACAA TCCGCTAACA TCAAAACCCT AATCATTTCA GAAGGAGATT TAGGAAGAGA AAAAACAGTC AATGGTCGCA TAGTAATCAA TGAAAATAAA CGTTTCAAAA TCAGTAGTAG AGTAAGCGGG AGAATTGAAA AACTTTACAT AAAAAGTCTT GGGGAAACAA TAAGCAAAGG AGTAAAACTA TATGATTTAT ATAGCGAAGA TCTTTTAGTT GCTCAAAGGG AATACCTGAT TGCAATAGAA AAATCTAAAG AGTTTTCAGG ATCTGAATTG GATTATATTC AATTAGCCGA TGGGGCCAAA AACAAATTGA TTTTATGGGG AATGAATGAA AATCAAATAA AATCACTGAT TAATAAAAAA GAACTAAGCA ACACCGTCAC CATTTATAGC CCATATAAAG GAGTTGTAAC TTCAGTAAAC AAAAGAGAAG GCGATTATGT AATGGATGGA GATGTTGTCT TCGAAACAGC GGACCTATCT ACGTTGTGGG TAGAAGCGGA ATTGTATGCC GGCGAAGTAA ATGAGTTTGA TGTGAATGAC CCCGTTGCAA TAAAGATTAT TGGTTTCCCA GGAAAAATAT GGAACAGTCG TATTGACTTT TTTGCACCTC AGCTACAAAC TCAGTCTAAA GTAAATCTTG TAAGAGCTGA AATATCTAAT ACTGACATGT CATTAAGGCC AGGAATGCAA GCAAATATTG TATTAAAAGA AAACACAAAG AAAGCGTTAT TTCTTCCATT AAATGCAATA CTTCAGGATT CTAAGGGAGC AACGGTTTGG ATTAAGGAAA AAGATGGTTC TTATCATAGC AGGATGGTTA TAACAGGCAT TGAAAGCAAT GACAATATAG AAATCCGTTC AGGTATCGAG GCCGGCGAAG AAGTTGTTAT CAATGGTGCA TACTTGCTCA ACAGCGAATA TATATTTAAA AAAGGAACTA ATCCTATGGC AGGTCACGAT ATGTCTAACA TGTAA
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Protein sequence | MNLHMKNIVL GLTLLIVAWS CNKESGKNTP DNVFYTCSMD PQVMEKKPGK CPICKMDLTK VIIDKNDMQS GLKLNNEQEQ SANIKTLIIS EGDLGREKTV NGRIVINENK RFKISSRVSG RIEKLYIKSL GETISKGVKL YDLYSEDLLV AQREYLIAIE KSKEFSGSEL DYIQLADGAK NKLILWGMNE NQIKSLINKK ELSNTVTIYS PYKGVVTSVN KREGDYVMDG DVVFETADLS TLWVEAELYA GEVNEFDVND PVAIKIIGFP GKIWNSRIDF FAPQLQTQSK VNLVRAEISN TDMSLRPGMQ ANIVLKENTK KALFLPLNAI LQDSKGATVW IKEKDGSYHS RMVITGIESN DNIEIRSGIE AGEEVVINGA YLLNSEYIFK KGTNPMAGHD MSNM
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