| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1494 |
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| Symbol | radC |
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| ID | 4185391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1723179 |
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| End bp | 1723880 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071487 |
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| Product | DNA repair protein |
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| Protein accession | YP_678105 |
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| Protein GI | 110637898 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000647961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000976606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGAGCAAT ATATAATACC ACCGCCCACA AAACTATCCT GGACAGAAGA AGAACGTCCA
AGAGAAAAAC TTTTATCAAA AGGAATCGCA GCACTTAGCG ATGCCGAACT TATTGCCATC
TTGCTGGGAT CCGGCACCGT CAATCTAAGA GCTGTTGATC TTGCCAAACA TATCCTTCAA
GATAACAACC AGAGTCTGTA TACATTGGGC CGACTAAGTG TAAGGGATCT ACAGAAAACC
AAGGGGATTG GAAAAGCTAA AGCTATTATT TTGGTTAGTG CGTTTGAATT GGGTCGACGA
CGAAAAAATA CAAATGTGGA GATAAAACCG CAGGTAAAGT CATCTGAAGA TGTATATAAT
TATATTCAGG CGGATCTCGC CGACCTGATG CATGAAGAGT TTTGGATTTT ATTATTGAAC
TGTGACAACC GTATCGAAAA GAAAATACGC ATAAGTACAG GTGGCGTTTC CGCAACAATA
GTTGATCCTA AGCTCATTTA CAAATATGCA TTAGAAAATC TGGCTTCTTA TATTATCTTA
ATACATAACC ATCCTTCAGG AAATACTAAA CCTAGTCAGT CAGATTACAA TTTAACTAAA
AAGTTATGTG AAGCAGGCGC ATTTCTAGAA ACACCTGTAT TGGATCATGT GATAATTTGC
AATCATACAT GGTATAGTTT TGCAGATGAA GGAAAAATAT AA
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| Protein sequence | MEQYIIPPPT KLSWTEEERP REKLLSKGIA ALSDAELIAI LLGSGTVNLR AVDLAKHILQ
DNNQSLYTLG RLSVRDLQKT KGIGKAKAII LVSAFELGRR RKNTNVEIKP QVKSSEDVYN
YIQADLADLM HEEFWILLLN CDNRIEKKIR ISTGGVSATI VDPKLIYKYA LENLASYIIL
IHNHPSGNTK PSQSDYNLTK KLCEAGAFLE TPVLDHVIIC NHTWYSFADE GKI
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