| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1491 |
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| Symbol | umuD |
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| ID | 4185388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1719087 |
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| End bp | 1719515 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638071484 |
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| Product | SOS mutagenesis protein UmuD |
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| Protein accession | YP_678102 |
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| Protein GI | 110637895 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00671192 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000906446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGATTGAGC TGTATCAAAT TGATTCTTCT ACTGCTACAC TGATTCCATT TATTTCAGAT
AAGCTGGTTT GTGGTTTCCC TTCGCCAGCT ACAGATTACC TTGATCTATC CATTGATTTA
AATAGAGAGC TTATTACTAA TCCGAATGCT ACTTTTTGCG GAAGGGTAAA AGGAAACAGC
ATGATTGATG CCGGAATTGA GGAAGGAGAT GTATTGATCA TTGATCGTTC AAAAGAGCTT
ACCGATAACA GCATAGCGGT TTGTTTTTTA GATGGCGAGT TTACCGTTAA GCGGGTGAAG
GTTTATAAGT CTAAAAAAGA AATTCATTTG ATGCCTTCTA ATAAAAATTT CAAACCCATT
ATTGTTACTC CCGATAATGA ATTTACAATA TGGGGTATTG TAGTATACAC AATTAAAAAA
AATTATTGA
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| Protein sequence | MIELYQIDSS TATLIPFISD KLVCGFPSPA TDYLDLSIDL NRELITNPNA TFCGRVKGNS
MIDAGIEEGD VLIIDRSKEL TDNSIAVCFL DGEFTVKRVK VYKSKKEIHL MPSNKNFKPI
IVTPDNEFTI WGIVVYTIKK NY
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