Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1489 |
Symbol | |
ID | 4185386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1716904 |
End bp | 1718001 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638071482 |
Product | hypothetical protein |
Protein accession | YP_678100 |
Protein GI | 110637893 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0715409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000118566 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAATTA TCAAGCTTCG GAATAACAGT CCTGAATTCA ATTATAAGAT GATCGTCCTT GCAAGGGAAT CCAGAGGCAT TGGGCAGCGT GAGCTGGCTA CACTGGTAGA AACCGATCAG GGTAATCTTT CCCGTATTGA GAAAGGCGCA CAAACTCCTG TTAAAGATAT GATCGAACGC ATTAGTAAGG CACTCGATTA TCCGGTAAGC TTTTTCAGGC TTCAGCATTC AGTGTATGAT TTTTCAAAAT CGTATTACAG ACGCAAGCTT AAAATGCCTA AAAAGGAAAT TGAATTGTCA GAAGCAAAGA TCAATATTTC AAAAATCAAT ATTGAAACAC TGATCCGTGC CGTAGAGCTT CCTGAACCCA ATTACCCAAC CTTTGATCTT TCAAAAGACC TGAGTGCTTC AGCCTGCGCT ATACAGCTTC GTAAATACTG GAAACTTCCG CATGGCAGAG TCGAGAATTT TACAAAGGTT CTTGAAGATA ATGGCGTACT GGTTGCGAAC ATTGACTTTG CAGGTATTGA AGTAGATGGG CATGCGATCC TTACCGAAAA TAATCTGCCG ATAATCTTTA TCAATAAAAA CATTACAGCA GATCGCTATC GACTAACGCT TGCGCATGAG CTTGGCCATT TGTGCCTGCA TGTAGGAAGA GAGATAGCAG AAGATCGTGA TGTGGAGCAG GAAGCATTTA TGTTTGCAGC CGAACTACTA ACACCTGAAG TAGAAATTGC TCCGGATCTC TGTGAAGTGA GTATTGAAAA GCTAAAGGAG CTAAAAAAAT ACTGGAAGGT TTCCATGGGA TCACTTCTTA AGCGAGCGCA CGTACTTAAA GGCGTTAGCG ATAATCAGTA TAAGTATCTT TGGCAGCAAA TGGGTAATAT GGGATACAAA ACCGTTGAAC CCAAAGAGCT TGAATTTGAA AAGGAAAAGC CAAAGCTTTT AAAAGAAATT ATTGATGCAC ATCTTGAAGA GCTTCAATAT AGCGAAGATG AGCTTTCTGA ACTCTTAGGA TTAAAGATCC AGGAGTTTGC TAAAAGCTAT GCTCCAGCAA GACCAAGACT GAGAGTATCT AAAGGCAAAG CCCGTTAA
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Protein sequence | MKIIKLRNNS PEFNYKMIVL ARESRGIGQR ELATLVETDQ GNLSRIEKGA QTPVKDMIER ISKALDYPVS FFRLQHSVYD FSKSYYRRKL KMPKKEIELS EAKINISKIN IETLIRAVEL PEPNYPTFDL SKDLSASACA IQLRKYWKLP HGRVENFTKV LEDNGVLVAN IDFAGIEVDG HAILTENNLP IIFINKNITA DRYRLTLAHE LGHLCLHVGR EIAEDRDVEQ EAFMFAAELL TPEVEIAPDL CEVSIEKLKE LKKYWKVSMG SLLKRAHVLK GVSDNQYKYL WQQMGNMGYK TVEPKELEFE KEKPKLLKEI IDAHLEELQY SEDELSELLG LKIQEFAKSY APARPRLRVS KGKAR
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