Gene CHU_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1472 
SymbolflgJ 
ID4185545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1707791 
End bp1708303 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content40% 
IMG OID638071465 
Productpeptidoglycan hydrolase 
Protein accessionYP_678083 
Protein GI110637876 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1705] Muramidase (flagellum-specific) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0862388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0020781 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAAGAG AAGAATACAT TGAAAAATTT AAAGCTATAG TTATTGATTC AGTATCAGGA 
ACAGGACTGT TCCCATCGGT TATGATGGCG CAGGCAATCT TGGAAAGTTC AAATAAGTAC
GGTCAGCCAG GTGCCAGTAT GCTCGCAAAG GAATTCAACA ACCACTTTGG TGTAAAGGCG
GATAGAAGCT GGAAAGGTAA AAAGGTAAAC TTAAAGACCC GTGAAGTTAT TAAAAATAGC
AGTGTAATGA TTGGCGACTT TTTCCGAGTG TACGATCATG CTGCAAACTC CTTCAAAGAC
CGTAATACAT TTCTTTTAAA AAATCCTACT TACACAAAAG CAGGTGTATT CCTGTCTCAA
ACACCCGAAG CACAAGCTGA AGCTTTACAG CGTGCAGGCT ATGCTACTGA TCCAAAATAT
GCAAACCTTA TTAAGGCGCT CATTAAAATG TATAATCTGA AGGAGCTCGA TGAGATAGCA
AGAAAAAACG ACTCATCCTC CATGGTAGCT TAA
 
Protein sequence
MTREEYIEKF KAIVIDSVSG TGLFPSVMMA QAILESSNKY GQPGASMLAK EFNNHFGVKA 
DRSWKGKKVN LKTREVIKNS SVMIGDFFRV YDHAANSFKD RNTFLLKNPT YTKAGVFLSQ
TPEAQAEALQ RAGYATDPKY ANLIKALIKM YNLKELDEIA RKNDSSSMVA