Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1463 |
Symbol | xis |
ID | 4184019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1698622 |
End bp | 1698951 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638071456 |
Product | excisionase |
Protein accession | YP_678074 |
Protein GI | 110637867 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00572875 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0821258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGATA AAATAATAGT TACCACTCAC GACGAATTAA TCTTTTTAAT TGAGGATTCT GTTCGTAAAA TATTGTCAGA AAAAAGTGAA ATTAAACACA ACGAAAGTAG CACATTGCTG CTTTCACTTA AGGAAGCTTC AGAATTTTTA AAGCTTGCAC CTCAAACAAT TTATGGATTT ACTTCCAAAA GATTGATTCC CTTTATCAAA CGAGGAAAGA AACTCTATTT CAAAAAAAAT GAATTAGAGG AGTGGCTGGA CGAGGGGAAG AAAAAGTCGT TGGCTGAGTT AAATAAGGAA TTTAAACTAA ACGGTAATAT TAAATTGTAA
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Protein sequence | MRDKIIVTTH DELIFLIEDS VRKILSEKSE IKHNESSTLL LSLKEASEFL KLAPQTIYGF TSKRLIPFIK RGKKLYFKKN ELEEWLDEGK KKSLAELNKE FKLNGNIKL
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