Gene CHU_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1463 
Symbolxis 
ID4184019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1698622 
End bp1698951 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content32% 
IMG OID638071456 
Productexcisionase 
Protein accessionYP_678074 
Protein GI110637867 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00572875 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0821258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGATA AAATAATAGT TACCACTCAC GACGAATTAA TCTTTTTAAT TGAGGATTCT 
GTTCGTAAAA TATTGTCAGA AAAAAGTGAA ATTAAACACA ACGAAAGTAG CACATTGCTG
CTTTCACTTA AGGAAGCTTC AGAATTTTTA AAGCTTGCAC CTCAAACAAT TTATGGATTT
ACTTCCAAAA GATTGATTCC CTTTATCAAA CGAGGAAAGA AACTCTATTT CAAAAAAAAT
GAATTAGAGG AGTGGCTGGA CGAGGGGAAG AAAAAGTCGT TGGCTGAGTT AAATAAGGAA
TTTAAACTAA ACGGTAATAT TAAATTGTAA
 
Protein sequence
MRDKIIVTTH DELIFLIEDS VRKILSEKSE IKHNESSTLL LSLKEASEFL KLAPQTIYGF 
TSKRLIPFIK RGKKLYFKKN ELEEWLDEGK KKSLAELNKE FKLNGNIKL