Gene CHU_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1461 
Symbol 
ID4184017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1693734 
End bp1696094 
Gene Length2361 bp 
Protein Length786 aa 
Translation table11 
GC content43% 
IMG OID638071454 
Producthypothetical protein 
Protein accessionYP_678072 
Protein GI110637865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.132626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA AACTACTTTT ACTACTAGCT GCGATTACAG TATTTTGCCA GCTTAGCTAT 
TCACAAGGAC AAGGAAGCGG GTGGGTTGCA TCTATCGGCC CAAGTCCATC TGACCCTACA
ACTAAAACAA TTATTTCTGA AGGACCTACA AGTATCAATT TTGGACAGAC ATATAATTTT
AAAGCAAGAT CTTCTATATT TCCACAGGGC TTAGTTGATC TTTCCAGTGA ATACGAAATC
ACGGAATGCG TGATTTTATG GAATTGGTAT CTTGTAAAAG GAACGATTGA CAATCCACTT
CCGGCTGGTT ATCAAAATGT GGCTTCAAAT TTATTGCCAG GTCACGGCAG TTCTATAAAC
ATCACCATCC CGGCAACAAC CGGAACGTAT ACTGTAGTTG TGCAGGCAAT ATCATTTTCA
AGTGCAACAC CCCAGTGTTC GTACAAATGT GATGGTAAAG CATCTACGTA CTCAGGTTAC
AGAGTCACCT ACAACGAACC TGTTAATTAT GTTTGCAAAA ATAATCTGGG AAGACCAGCG
TCGGGTTCAA ACAGTGTAAA CGGAACACAA AGTTATTACA GTCTTTCTCC AAATGTACAG
GTTAAAGTAT GTAACATTCC CGGCAGCTAT GAAGGTTCAA CCTCTACCGG ATGGTGCCGC
AGATTTATCT GGTGGATGTC TGTAGATGGC GGTGCACCGA TTGAAGTAAT TTATGGTAAC
AAATTATGTA ACGGCACAAA CACAACCGAT TCTGATTTTG ATTTAAATGT ACCTTTACTT
ACGGCTGTTC CAGGTACGCA TACCTATGGT TTCACCAGAA ACTACCAGCT TATTAAGCCC
AATGGTGATG TAAGCTCAAA CAACTGGAGC AACTGGACGT ATGTTACACT AAGTACCGGC
CATATGCTTG ATTATTTTAA TTTCAGTTAT ACAACAAGTA CGCCTAGCTG CGGACAAACA
ATAACAATGA GTCTTCCGAC TGTAGCAAAC GCAAACTACA GCTGGTCTGT ACAGGATGGT
TCTGCAAGCC CCGCTACCGG CCCAAGCACA CAGGTTACCT TTAACAGCCA GGGGGCAAAG
AATGTAAATG TAACAGTAAC ATCTACCGAC GGAAGCTTTC CTCCGAAAAC ATTTACAAAG
GTTATGAACG TACAAAACAG GATTGCAGAT TTTACGCTTC CTGCATTGTC CGGTAATGCC
GCTGCAACTA CAATCAGTGT GCCGGCACAG AATAATGTTA CGTATACCTG GTCTGTTCCG
GGAGCAGTGT TTAATGGTGT ACCAACGAAT GTATGCAACA TCAAAAATTT CACTTCTGCC
AAAACAGGAA CATACTCGCT TACCATTACA CCTGCTGCGG GAACATGCGG AACAGCTATT
ACGAAAACAG GTACAATCAA TATTGCCCAT CCGGCTCTGC AGTTCAGCGG AACAACGTAT
GCACAGGTAC CAAACAGCCC GGCATTTAAT TTAGGAACAG GAAACTTTAC CATGGAAGCC
TGGATAAATG CATCAAATGC TCAGGTTTCT TTTCCGCAGA TCATGTCGTT ACGTACATCG
GGATCTGATG GTTTCCTTTT CGGATTGTTC AGCTCCGGAA AACCTTTTAT CCAGATGGGT
GGCAGCACTG GTAACTGGGA ATGCGGTAAC TGCGCTGACT TAAGAGATAA CAAATGTCAC
CACATAGCCA TTACCAGAAA TGCCGATGTA ATGAGTTTTT ATCAGGATGG TGTATTAATG
AGTTCTTACA CGGTTGGGTA TGCAACAAGG AATATACAAA GTACCGGTCC GTTAAATATC
GGAGTGGATG CCGCGTCACC TGGCAACACG TATTTTAAAG GGATGCTGCA TGATGTCCGT
ATCTGGAATG TTGCTAGATC TTCCTCAGAA ATTGCTGCCA ATTATTCTTC TCTATTGGCA
GGAAATGAAC CAGGTCTTAT AGGAAACTGG AAAATGAATG AAGGACAAGG CCAGTCATTG
CTTAACAGTG CAGCCGGCAG CTCTAGTGCA ACGTTGGGTA CAACTTCAGC AACGGAAGCT
GCTGATCCTG CCTGGGTGAG CTATACCTGT AACAACAACA ATTACCGTAC AGGTGATAAT
ATGTCAATGG CTGATAATGC ACCCGACGAT GGTTTAGGTA TTCAGGAATA TGGAGAAACG
GCTTTCACTA TCTACCCGAA TCCGGTAACA TCGGGCCTTG TATACTTTGG TAAAACTGCT
TCTGAATTCA CGTTGATTAA CAGTGAAGGT GTAGTGGTTC GCAAAGGAAC GAATACGGAT
AAAATGGACG TATCTAATCT TTTACAAGGA CTTTACATTC TTAAGCTGGA TAACACGGCA
GAAAAAATAG TTATTCAATA A
 
Protein sequence
MKLKLLLLLA AITVFCQLSY SQGQGSGWVA SIGPSPSDPT TKTIISEGPT SINFGQTYNF 
KARSSIFPQG LVDLSSEYEI TECVILWNWY LVKGTIDNPL PAGYQNVASN LLPGHGSSIN
ITIPATTGTY TVVVQAISFS SATPQCSYKC DGKASTYSGY RVTYNEPVNY VCKNNLGRPA
SGSNSVNGTQ SYYSLSPNVQ VKVCNIPGSY EGSTSTGWCR RFIWWMSVDG GAPIEVIYGN
KLCNGTNTTD SDFDLNVPLL TAVPGTHTYG FTRNYQLIKP NGDVSSNNWS NWTYVTLSTG
HMLDYFNFSY TTSTPSCGQT ITMSLPTVAN ANYSWSVQDG SASPATGPST QVTFNSQGAK
NVNVTVTSTD GSFPPKTFTK VMNVQNRIAD FTLPALSGNA AATTISVPAQ NNVTYTWSVP
GAVFNGVPTN VCNIKNFTSA KTGTYSLTIT PAAGTCGTAI TKTGTINIAH PALQFSGTTY
AQVPNSPAFN LGTGNFTMEA WINASNAQVS FPQIMSLRTS GSDGFLFGLF SSGKPFIQMG
GSTGNWECGN CADLRDNKCH HIAITRNADV MSFYQDGVLM SSYTVGYATR NIQSTGPLNI
GVDAASPGNT YFKGMLHDVR IWNVARSSSE IAANYSSLLA GNEPGLIGNW KMNEGQGQSL
LNSAAGSSSA TLGTTSATEA ADPAWVSYTC NNNNYRTGDN MSMADNAPDD GLGIQEYGET
AFTIYPNPVT SGLVYFGKTA SEFTLINSEG VVVRKGTNTD KMDVSNLLQG LYILKLDNTA
EKIVIQ