| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1460 |
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| Symbol | tatC |
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| ID | 4184016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1692774 |
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| End bp | 1693586 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638071453 |
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| Product | Sec-independent protein translocase TatC |
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| Protein accession | YP_678071 |
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| Protein GI | 110637864 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.403826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0434954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGGGAAAT CATTTGTTAA AGATCATTCA GCTGAATTTT CTGTATTAGA TCACATAGAA
GAATTAAGAT GGAGACTTAT ACGCGCTGTA GTAATCATTC TGGTTTTTAC AGTTGTAGCG
TTTATTTACA TGCCGTACAT TTTTCATACG ATTATTCTTG CACACGCTTA TCCGGATTTC
TGGACATACA GAATGCTGTG CAGGATCGAT AACAGCTTAT GTGTGGATAC ATTAAACTTT
ACCTTGTTAA GCAGGGAAAT GTCGGGCCAG TTTACCATTC ATTTAAAGTC GGCATTTATT
GTGGGATTCA TTGCAGGGTT TCCATTTATT GTATGGGAGA TCTGGAAATA CATAAAACCT
GCTTTACACA AAAATGAGAT TAACGTAAGT TTTAAAGTAG TTTCTGTTGT GCCGTTTTTG
TTTATCATAG GAATTCTTTT CGGGTATTTT ATACTGGCGC CTTTATCCGT TAATTTTTTA
GCAAACTACA ACATCGATGC AGCTATTCAG AATCAGTTTG ATATTACTTC GTATGTTTCA
ACCGTAACCA TTATGGTACT GGTATGCGGA TTGATTTTTC AATTGCCCGT ACTGGTTTAT
TTTCTGGCAA TGGCTGGCAT TCTAACACCG GAATTTATGC GGAAGTATCG CCGGGTGGCA
ATCATCCTGG TATTTATTAT TGCCGGAATT ATTACACCAT CACCGGATAT TATGAGCCAG
CTGATTGTTG CCATTCCGAT TTATCTGTTA TATGAGATCA GTATTTATAC GGCTGCAAGT
ATCAGTAAGA AACGAAAGAT GCAGGAAGTA TAA
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| Protein sequence | MGKSFVKDHS AEFSVLDHIE ELRWRLIRAV VIILVFTVVA FIYMPYIFHT IILAHAYPDF
WTYRMLCRID NSLCVDTLNF TLLSREMSGQ FTIHLKSAFI VGFIAGFPFI VWEIWKYIKP
ALHKNEINVS FKVVSVVPFL FIIGILFGYF ILAPLSVNFL ANYNIDAAIQ NQFDITSYVS
TVTIMVLVCG LIFQLPVLVY FLAMAGILTP EFMRKYRRVA IILVFIIAGI ITPSPDIMSQ
LIVAIPIYLL YEISIYTAAS ISKKRKMQEV
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