Gene CHU_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1458 
Symbol 
ID4184014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1691722 
End bp1692435 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content42% 
IMG OID638071451 
Producthypothetical protein 
Protein accessionYP_678069 
Protein GI110637862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0671711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0432371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTAAGA AGGCGAGTGA TTTCAGCTTA AAAGCTGCCC TTACTTCGTT ACCATTTGCA 
TTGTTTGCTA TGCCACGCAT TGTTCAGGCA AGTACACAGG CAAATACACA ATCGGTAACA
GATACATTGA ATTATGCATT AACACTTGAA TATCTGGAAG AGGCTTTTTA TGTACAGGGG
TTAGCTAAAT CAGGTTTGAT TGACAGTGCA GATATGACAA TTTTTAATCA GATCAAAAAA
CATGAATCAG CGCATGTTGT TTTCCTGAAA AATGTATTAG GGAGTGCCGC TAATCCTTCT
CCAGCATTTG ATTTTGGTAC CGCCTTTGAT AGCTATGCAA ATTTTCTTGC AACTGCGCAG
GCATTGGAAG ATACAGGTGT TAGAGCATAT AAGGGTCAGG CAGGTAATCT TATAACAAAT
AAAGTAGCCT TAACAGCAGC GTTACAGATC CATTCCGTAG AGGCACGTCA CGCATCAGAA
GTGCGCAGGC TTAGAATGCT GAATGGCTGG ATCGGTGTGG GTGAAGCAGG CGCTACGTAT
GGAGCCGGTG AGGATGCAAA TTTCCCTGCA GAAAGTAATC TAACCCAGGG TGGTGTTGAT
CTGTCTATTT TGGCTTCAGC TGATGTTACG ATGACAAATA TCGCAGAAGC ATTTGATGAA
CCATTGGATA AAAATACCGT GTTCGGTATT GCACAAGGGT TTATTGTAAG TTAA
 
Protein sequence
MFKKASDFSL KAALTSLPFA LFAMPRIVQA STQANTQSVT DTLNYALTLE YLEEAFYVQG 
LAKSGLIDSA DMTIFNQIKK HESAHVVFLK NVLGSAANPS PAFDFGTAFD SYANFLATAQ
ALEDTGVRAY KGQAGNLITN KVALTAALQI HSVEARHASE VRRLRMLNGW IGVGEAGATY
GAGEDANFPA ESNLTQGGVD LSILASADVT MTNIAEAFDE PLDKNTVFGI AQGFIVS