Gene CHU_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1457 
Symbol 
ID4184013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1690907 
End bp1691626 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content42% 
IMG OID638071450 
Producthypothetical protein 
Protein accessionYP_678068 
Protein GI110637861 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.036624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0457082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACA CTACAGAGAA AAACCAGATC AGTGATCTTG GTAAAAATCG CAGAATGTTT 
CTGAAAACAG CAGGAGCAAC TGCTGTAGCT TCGGCTATTC TTATTTCATG TAAGAAGAAG
GATGATGATG ATCCGGCTCC TTCTGATATG GGTGTAAATC TGGGAAGCGG GGATACCGGG
ATTTTAAATT ATGCGTATGC ACTGGAACAG CTGGAAGCAG CTTTTTACAT CCAGGTAGTA
GCAAACAGTA AGTTTACAAC AATTTTTTCT GCATCCGAGC AGCAGTTGTT GAAAGACATC
AAAGCACATG AAATTGTGCA CAGAGATTTT TTAAAAGCTG CACTTTCAAC AAGTGCTATC
CAGGATCTTG AGGTTAATTT TTCAAGCATT GATTTTGGTA ACAGAGCAAG CGTATTAGGT
ACGGCTAAAG CGTTTGAAGA TCTGGGTGTA TCGGCCTATA ATGGGGCTGG CCAATTGATC
TCTAATACAG CCAACGGCCT TGTATACCTT GGTCTGGCTG GGAAAATTGT TTCTGTTGAA
GCGAGACATG CCGCTGCAAT CAGAGATTTG TTAAATCCTA AATCAGCAGA TTTCTCCGGA
GACGATGTTG TAGATGCTAC AACAGGTCTT GATGGTGCAA AAACGCCAGC TCAGGTTCTT
GCTATTGCAG GAACATACAT CAAGACAAAA ATCAATGCAA GTAATTTACC AACCGCTTAA
 
Protein sequence
MQNTTEKNQI SDLGKNRRMF LKTAGATAVA SAILISCKKK DDDDPAPSDM GVNLGSGDTG 
ILNYAYALEQ LEAAFYIQVV ANSKFTTIFS ASEQQLLKDI KAHEIVHRDF LKAALSTSAI
QDLEVNFSSI DFGNRASVLG TAKAFEDLGV SAYNGAGQLI SNTANGLVYL GLAGKIVSVE
ARHAAAIRDL LNPKSADFSG DDVVDATTGL DGAKTPAQVL AIAGTYIKTK INASNLPTA