Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1457 |
Symbol | |
ID | 4184013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1690907 |
End bp | 1691626 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638071450 |
Product | hypothetical protein |
Protein accession | YP_678068 |
Protein GI | 110637861 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.036624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0457082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAACA CTACAGAGAA AAACCAGATC AGTGATCTTG GTAAAAATCG CAGAATGTTT CTGAAAACAG CAGGAGCAAC TGCTGTAGCT TCGGCTATTC TTATTTCATG TAAGAAGAAG GATGATGATG ATCCGGCTCC TTCTGATATG GGTGTAAATC TGGGAAGCGG GGATACCGGG ATTTTAAATT ATGCGTATGC ACTGGAACAG CTGGAAGCAG CTTTTTACAT CCAGGTAGTA GCAAACAGTA AGTTTACAAC AATTTTTTCT GCATCCGAGC AGCAGTTGTT GAAAGACATC AAAGCACATG AAATTGTGCA CAGAGATTTT TTAAAAGCTG CACTTTCAAC AAGTGCTATC CAGGATCTTG AGGTTAATTT TTCAAGCATT GATTTTGGTA ACAGAGCAAG CGTATTAGGT ACGGCTAAAG CGTTTGAAGA TCTGGGTGTA TCGGCCTATA ATGGGGCTGG CCAATTGATC TCTAATACAG CCAACGGCCT TGTATACCTT GGTCTGGCTG GGAAAATTGT TTCTGTTGAA GCGAGACATG CCGCTGCAAT CAGAGATTTG TTAAATCCTA AATCAGCAGA TTTCTCCGGA GACGATGTTG TAGATGCTAC AACAGGTCTT GATGGTGCAA AAACGCCAGC TCAGGTTCTT GCTATTGCAG GAACATACAT CAAGACAAAA ATCAATGCAA GTAATTTACC AACCGCTTAA
|
Protein sequence | MQNTTEKNQI SDLGKNRRMF LKTAGATAVA SAILISCKKK DDDDPAPSDM GVNLGSGDTG ILNYAYALEQ LEAAFYIQVV ANSKFTTIFS ASEQQLLKDI KAHEIVHRDF LKAALSTSAI QDLEVNFSSI DFGNRASVLG TAKAFEDLGV SAYNGAGQLI SNTANGLVYL GLAGKIVSVE ARHAAAIRDL LNPKSADFSG DDVVDATTGL DGAKTPAQVL AIAGTYIKTK INASNLPTA
|
| |