Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1446 |
Symbol | alaS |
ID | 4184002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1674658 |
End bp | 1677291 |
Gene Length | 2634 bp |
Protein Length | 877 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638071439 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_678057 |
Protein GI | 110637850 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.714674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAG CCGAAATCCG TCAGCAATTT CTGGATTTCT TTGCCTCCAA AGGCCACCAA ATTGTTCCTT CTGCACCGAT CGTAAATAAA AATGATCCGA CGTTGATGTT CACAAACGCC GGGATGAATC AATTCAAAGA TTATTTCCTG GGAAATGAAA CGCCTAAATA CCGCCGTATT GCCGATACAC AAAAATGTTT GCGTGTATCC GGTAAACACA ACGATCTGGA AGAGGTGGGT ATTGATACCT ATCACCATAC CATGTTTGAA ATGCTTGGTA ACTGGTCGTT CGGAGATTAC TTCAAAGAAG AAGCCATTGC CTGGTCTTGG GAATTATTAA CTTCCGTATA CAAACTTCCG AAAGACCGTT TGTATGTAAC CATTTTTGAA GGCGATGATA AAGAAAAATT AGCTCGCGAT ACAGAAGCAT ATAACTTCTG GAAAAAATGG ATCGCTGAAG ATCGTATTCT GTTAGGGAAT AAAAAAGATA ACTTCTGGGA AATGGGTGAG CAAGGCCCAT GCGGCCCATG TTCAGAGATT CACGTAGATC TTCGTACAGA CGAAGAAGTA AAAGCTGTTG ATGGTAAAAC ATTGGTGAAC AACGATCACC CGCAGGTTGT AGAGATCTGG AACAACGTAT TCATACAGTT CAACCGTAAA GCGGATGGCT CGTTGGAAGA ACTTCCGGAC AAGCACGTAG ATACCGGTAT GGGTTTCGAA CGTCTGTGTA TGGCGATTCA AAAGAAGAAA TCAAATTACG ATACGGATGT TTTTACACCC ATGATTGATT TCGTAGCGAA AGCTGCAGGA ATTAAATATG GTGCCGATGA GAAGACTGAC ATTGCAATGC GTGTTATGGC CGATCACATC CGTGCAATTT CATTTGTTAT CGCAGACGGA CAGTTGCCAT CGAATAATAA AGCGGGTTAC GTGATCCGCC GCATTCTGCG TCGTGCCGTG CGTTACGCAT ATACCTTCTT AAATTTAAAA GAACCGTTCT TATATAAATT GGTTGCTGTA TTGGCTGATC AATTGGCGCA TGTGTTCCCT GAATTGAAAT CTCAACAGGA TTTTGTTGCA AAAGTAGTGC AGGAAGAAGA AATCTCTTTC TTACGCACGC TTGATATTGG TTTGAGTAAA TTAGAGCAGA TCAGAGAAGA GTTGAAAGCG AAGAAAGCTA CAACCATTGA TGGTAAGACT GCTTTTGAAT TATACGATAC CTTTGGTTTT CCATTAGATC TAATTCAGTT GATTGCGCGT GAGAATGGAT TGACTGTTGA TGAAGCTGGC TTTGATACTG AAATGGCTGC ACAGAAACAA CGTTCTAAAA AAGCTGCGAG TGTTGAGACA AGCGACTGGA CAATCGTAAC AGAAGATGAT GAAGTGGAGT TTGTTGGTTA TGACCATTTA ATTTCTACGT CAAGAATTAT TAAATACCGT CAGGTTAAAA CAAAAGGCAA AGATCAGTAT CAGCTGGTAT TGGATACAAC TCCGTTCTAT GCGGAGAGCG GTGGACAGGC TGGGGATACG GGTACTTTAG TACAAGGTGA TAAGAAAATT AAAGTACTGA ATACGGTAAA AGAAAATAAC CTGATCATTC ACATTACGGA ACAATTGCCT GCTGACTTAA AAGCTCCGGT CGATTGTAAA GTAAATGTAT TGCAGCGTTC GCTTACAGAA AACAATCACT CGGCAACACA CTTGCTGCAT GCTGCATTGA AGCAGGTATT GGGTTCGCAT GTAAATCAAA AAGGTTCATT AGTGAATGAA TCGGTATTGC GTTTTGACTT TTCTCATTTC TCTAAAGTAA CAGAAGAAGA ATTGAAAAAA GTGGAACTGA TCGTAAATGA AAAGATCCGT GAAAATATTT CATTGAACGA AAGACGTAAT GTACCGATTG AAGAAGCAAA GAAACTCGGT GCAATGGCCT TGTTCGGTGA GAAATATGGG GAATATGTTC GTATGATCAC CTTTGATGAT TCCTTCTCCC GTGAATTATG CGGTGGTACA CACGTTTCTT CTACCGGTAA GATCGGATTC TTTAAAATTA CAAGTGAATC GTCTGTGGCA GCCGGTGTAC GCAGGATTGA AGCGTTAACG GCAACTGCTG CGGAGGTATT TGTAGATGAA CAGCAAACAA CGCTTGCGAA GATCACTGAA CTGATGAAGA ATCCAAAAGA CTTAGTGAAG TCGTTGGAAG ATTTATTGGA AGAGCGTATT GTATTGCAAA AACAATTGGA CGAATACCAG GCTGAGAAAT CAAAAGCAAT TGCAAAGTCA TTAAAAGATA CCGTTGAAAA AGTAGGGGAT ATCAATGTGA TCCGCGCGAA ACTTGTATTG CCATCAGTTG ATGCCATGCG TCAGGTTGCA TACGATCTGA AACAAACAGT AGATAATTTA CTGCTGGTGC TTGCGGTAAA TGTAGATGGC AAACCTAACA TTGCGGTAAT GATCTCGGAT AATTTAGTTG CAGATAAAGG ATTGAATGCG TCGCAGATGA TCCGTGAATT GTCGAAAGAA ATTCAGGGCG GCGGCGGCGG ACAGCCATTC TACGCTACAG CAGGGGGTAA AGAATTAAAT GGATTGGATA AAGTGATTGC AAAATCAAAA GATCTTATTC AGGTGCATGC TTAA
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Protein sequence | MTSAEIRQQF LDFFASKGHQ IVPSAPIVNK NDPTLMFTNA GMNQFKDYFL GNETPKYRRI ADTQKCLRVS GKHNDLEEVG IDTYHHTMFE MLGNWSFGDY FKEEAIAWSW ELLTSVYKLP KDRLYVTIFE GDDKEKLARD TEAYNFWKKW IAEDRILLGN KKDNFWEMGE QGPCGPCSEI HVDLRTDEEV KAVDGKTLVN NDHPQVVEIW NNVFIQFNRK ADGSLEELPD KHVDTGMGFE RLCMAIQKKK SNYDTDVFTP MIDFVAKAAG IKYGADEKTD IAMRVMADHI RAISFVIADG QLPSNNKAGY VIRRILRRAV RYAYTFLNLK EPFLYKLVAV LADQLAHVFP ELKSQQDFVA KVVQEEEISF LRTLDIGLSK LEQIREELKA KKATTIDGKT AFELYDTFGF PLDLIQLIAR ENGLTVDEAG FDTEMAAQKQ RSKKAASVET SDWTIVTEDD EVEFVGYDHL ISTSRIIKYR QVKTKGKDQY QLVLDTTPFY AESGGQAGDT GTLVQGDKKI KVLNTVKENN LIIHITEQLP ADLKAPVDCK VNVLQRSLTE NNHSATHLLH AALKQVLGSH VNQKGSLVNE SVLRFDFSHF SKVTEEELKK VELIVNEKIR ENISLNERRN VPIEEAKKLG AMALFGEKYG EYVRMITFDD SFSRELCGGT HVSSTGKIGF FKITSESSVA AGVRRIEALT ATAAEVFVDE QQTTLAKITE LMKNPKDLVK SLEDLLEERI VLQKQLDEYQ AEKSKAIAKS LKDTVEKVGD INVIRAKLVL PSVDAMRQVA YDLKQTVDNL LLVLAVNVDG KPNIAVMISD NLVADKGLNA SQMIRELSKE IQGGGGGQPF YATAGGKELN GLDKVIAKSK DLIQVHA
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