| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1446 |
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| Symbol | alaS |
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| ID | 4184002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1674658 |
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| End bp | 1677291 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638071439 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_678057 |
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| Protein GI | 110637850 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.714674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAG CCGAAATCCG TCAGCAATTT CTGGATTTCT TTGCCTCCAA AGGCCACCAA
ATTGTTCCTT CTGCACCGAT CGTAAATAAA AATGATCCGA CGTTGATGTT CACAAACGCC
GGGATGAATC AATTCAAAGA TTATTTCCTG GGAAATGAAA CGCCTAAATA CCGCCGTATT
GCCGATACAC AAAAATGTTT GCGTGTATCC GGTAAACACA ACGATCTGGA AGAGGTGGGT
ATTGATACCT ATCACCATAC CATGTTTGAA ATGCTTGGTA ACTGGTCGTT CGGAGATTAC
TTCAAAGAAG AAGCCATTGC CTGGTCTTGG GAATTATTAA CTTCCGTATA CAAACTTCCG
AAAGACCGTT TGTATGTAAC CATTTTTGAA GGCGATGATA AAGAAAAATT AGCTCGCGAT
ACAGAAGCAT ATAACTTCTG GAAAAAATGG ATCGCTGAAG ATCGTATTCT GTTAGGGAAT
AAAAAAGATA ACTTCTGGGA AATGGGTGAG CAAGGCCCAT GCGGCCCATG TTCAGAGATT
CACGTAGATC TTCGTACAGA CGAAGAAGTA AAAGCTGTTG ATGGTAAAAC ATTGGTGAAC
AACGATCACC CGCAGGTTGT AGAGATCTGG AACAACGTAT TCATACAGTT CAACCGTAAA
GCGGATGGCT CGTTGGAAGA ACTTCCGGAC AAGCACGTAG ATACCGGTAT GGGTTTCGAA
CGTCTGTGTA TGGCGATTCA AAAGAAGAAA TCAAATTACG ATACGGATGT TTTTACACCC
ATGATTGATT TCGTAGCGAA AGCTGCAGGA ATTAAATATG GTGCCGATGA GAAGACTGAC
ATTGCAATGC GTGTTATGGC CGATCACATC CGTGCAATTT CATTTGTTAT CGCAGACGGA
CAGTTGCCAT CGAATAATAA AGCGGGTTAC GTGATCCGCC GCATTCTGCG TCGTGCCGTG
CGTTACGCAT ATACCTTCTT AAATTTAAAA GAACCGTTCT TATATAAATT GGTTGCTGTA
TTGGCTGATC AATTGGCGCA TGTGTTCCCT GAATTGAAAT CTCAACAGGA TTTTGTTGCA
AAAGTAGTGC AGGAAGAAGA AATCTCTTTC TTACGCACGC TTGATATTGG TTTGAGTAAA
TTAGAGCAGA TCAGAGAAGA GTTGAAAGCG AAGAAAGCTA CAACCATTGA TGGTAAGACT
GCTTTTGAAT TATACGATAC CTTTGGTTTT CCATTAGATC TAATTCAGTT GATTGCGCGT
GAGAATGGAT TGACTGTTGA TGAAGCTGGC TTTGATACTG AAATGGCTGC ACAGAAACAA
CGTTCTAAAA AAGCTGCGAG TGTTGAGACA AGCGACTGGA CAATCGTAAC AGAAGATGAT
GAAGTGGAGT TTGTTGGTTA TGACCATTTA ATTTCTACGT CAAGAATTAT TAAATACCGT
CAGGTTAAAA CAAAAGGCAA AGATCAGTAT CAGCTGGTAT TGGATACAAC TCCGTTCTAT
GCGGAGAGCG GTGGACAGGC TGGGGATACG GGTACTTTAG TACAAGGTGA TAAGAAAATT
AAAGTACTGA ATACGGTAAA AGAAAATAAC CTGATCATTC ACATTACGGA ACAATTGCCT
GCTGACTTAA AAGCTCCGGT CGATTGTAAA GTAAATGTAT TGCAGCGTTC GCTTACAGAA
AACAATCACT CGGCAACACA CTTGCTGCAT GCTGCATTGA AGCAGGTATT GGGTTCGCAT
GTAAATCAAA AAGGTTCATT AGTGAATGAA TCGGTATTGC GTTTTGACTT TTCTCATTTC
TCTAAAGTAA CAGAAGAAGA ATTGAAAAAA GTGGAACTGA TCGTAAATGA AAAGATCCGT
GAAAATATTT CATTGAACGA AAGACGTAAT GTACCGATTG AAGAAGCAAA GAAACTCGGT
GCAATGGCCT TGTTCGGTGA GAAATATGGG GAATATGTTC GTATGATCAC CTTTGATGAT
TCCTTCTCCC GTGAATTATG CGGTGGTACA CACGTTTCTT CTACCGGTAA GATCGGATTC
TTTAAAATTA CAAGTGAATC GTCTGTGGCA GCCGGTGTAC GCAGGATTGA AGCGTTAACG
GCAACTGCTG CGGAGGTATT TGTAGATGAA CAGCAAACAA CGCTTGCGAA GATCACTGAA
CTGATGAAGA ATCCAAAAGA CTTAGTGAAG TCGTTGGAAG ATTTATTGGA AGAGCGTATT
GTATTGCAAA AACAATTGGA CGAATACCAG GCTGAGAAAT CAAAAGCAAT TGCAAAGTCA
TTAAAAGATA CCGTTGAAAA AGTAGGGGAT ATCAATGTGA TCCGCGCGAA ACTTGTATTG
CCATCAGTTG ATGCCATGCG TCAGGTTGCA TACGATCTGA AACAAACAGT AGATAATTTA
CTGCTGGTGC TTGCGGTAAA TGTAGATGGC AAACCTAACA TTGCGGTAAT GATCTCGGAT
AATTTAGTTG CAGATAAAGG ATTGAATGCG TCGCAGATGA TCCGTGAATT GTCGAAAGAA
ATTCAGGGCG GCGGCGGCGG ACAGCCATTC TACGCTACAG CAGGGGGTAA AGAATTAAAT
GGATTGGATA AAGTGATTGC AAAATCAAAA GATCTTATTC AGGTGCATGC TTAA
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| Protein sequence | MTSAEIRQQF LDFFASKGHQ IVPSAPIVNK NDPTLMFTNA GMNQFKDYFL GNETPKYRRI
ADTQKCLRVS GKHNDLEEVG IDTYHHTMFE MLGNWSFGDY FKEEAIAWSW ELLTSVYKLP
KDRLYVTIFE GDDKEKLARD TEAYNFWKKW IAEDRILLGN KKDNFWEMGE QGPCGPCSEI
HVDLRTDEEV KAVDGKTLVN NDHPQVVEIW NNVFIQFNRK ADGSLEELPD KHVDTGMGFE
RLCMAIQKKK SNYDTDVFTP MIDFVAKAAG IKYGADEKTD IAMRVMADHI RAISFVIADG
QLPSNNKAGY VIRRILRRAV RYAYTFLNLK EPFLYKLVAV LADQLAHVFP ELKSQQDFVA
KVVQEEEISF LRTLDIGLSK LEQIREELKA KKATTIDGKT AFELYDTFGF PLDLIQLIAR
ENGLTVDEAG FDTEMAAQKQ RSKKAASVET SDWTIVTEDD EVEFVGYDHL ISTSRIIKYR
QVKTKGKDQY QLVLDTTPFY AESGGQAGDT GTLVQGDKKI KVLNTVKENN LIIHITEQLP
ADLKAPVDCK VNVLQRSLTE NNHSATHLLH AALKQVLGSH VNQKGSLVNE SVLRFDFSHF
SKVTEEELKK VELIVNEKIR ENISLNERRN VPIEEAKKLG AMALFGEKYG EYVRMITFDD
SFSRELCGGT HVSSTGKIGF FKITSESSVA AGVRRIEALT ATAAEVFVDE QQTTLAKITE
LMKNPKDLVK SLEDLLEERI VLQKQLDEYQ AEKSKAIAKS LKDTVEKVGD INVIRAKLVL
PSVDAMRQVA YDLKQTVDNL LLVLAVNVDG KPNIAVMISD NLVADKGLNA SQMIRELSKE
IQGGGGGQPF YATAGGKELN GLDKVIAKSK DLIQVHA
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