Gene CHU_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1444 
SymboldprA 
ID4186241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1672632 
End bp1673726 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content43% 
IMG OID638071437 
ProductDNA processing protein 
Protein accessionYP_678055 
Protein GI110637848 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAA AAATTTACCA GGTTGCCGTG GGCCTTATCC CTGGTGTTGG CGCAGCTACA 
ACTAAAACGC TGATCAGTTA TTGCGGCTGC GCCGAACAGA TTTTTAAAAC ACCTAAAGGC
AAACTCAAAA ACATTCCGGG AATCGGAGCT GTTACGGTTG ATAATATTTA CAGCGCATCT
GTTTTACATG AAGCGGAATC TATTGTAGAG CGCGCGCAAA AACTCGACAC GCAATTGCTT
TTTTACACCG ATCCGGATTA TCCCAACCGG CTAAAACAAA TTCCGGATGC TCCTACACTT
CTCTATTATA AAGGATCATC AGCCCTTAAT CCACCTAAAT CCATTGCGAT TGTTGGAACA
CGAAAAGCAA CCGAATACGG AAGATCGGTT GTACGGAAAT TACTCGAAGA GATCGCATCT
TATAAACCGC TTGTTGTTAG CGGGCTGGCC TATGGAATAG ATATACAGGC GCACCGCGAC
GCATTGGAAC TTGGACTGGA AACCATAGGT GTTATGGCCA ATGGCACAAA CATCATCTAC
CCTTCCGTAC ACAAAAACAC TGCTCTTAAA ATGTTGGAGC AAGGTGGTTT ATTAAGCGAA
TATACATTTG ATTCCATTGC AGAACCCATG CGCTTTCCAG CCAGAAACCG CATCATTGCA
GGCATGACAG ATGCTACCAT TGTTATAGAA GCGACGCAAT CGGGAGGTGC TTTGATCACT
GCTGAAATTG CTGATAGTTA TGACCGGGAA GTACTGGCAG TACCAGGCAG AATAACGGAT
ATGGCTTCAG AAGGCTGTAA CAATCTGATC AAACAAAATA AAGCGCATGC ATTAACGTCT
GCGGCGGACT TAATTGAACT ATTAAACTGG GACATCACGC CTTCCCAACA AGCACACAAA
CATATTATCT TAGCTGATCT GGAAGAAGAT GAGCTGATGA TTTATGCTGT ACTTACCGAT
AATGAGGGCA TACATATTGA TGAATTAAGC TGGAAGTCGC AGTTATCCAT GCAAAAGATC
AGTTCGGTAT TATTGGAAAT GGAGTTCAAA GGAATTGTGA AGGCGCTTCC GGGCAAAAAA
TTCTCTTTAC GTTAA
 
Protein sequence
MQEKIYQVAV GLIPGVGAAT TKTLISYCGC AEQIFKTPKG KLKNIPGIGA VTVDNIYSAS 
VLHEAESIVE RAQKLDTQLL FYTDPDYPNR LKQIPDAPTL LYYKGSSALN PPKSIAIVGT
RKATEYGRSV VRKLLEEIAS YKPLVVSGLA YGIDIQAHRD ALELGLETIG VMANGTNIIY
PSVHKNTALK MLEQGGLLSE YTFDSIAEPM RFPARNRIIA GMTDATIVIE ATQSGGALIT
AEIADSYDRE VLAVPGRITD MASEGCNNLI KQNKAHALTS AADLIELLNW DITPSQQAHK
HIILADLEED ELMIYAVLTD NEGIHIDELS WKSQLSMQKI SSVLLEMEFK GIVKALPGKK
FSLR