| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1434 |
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| Symbol | metH |
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| ID | 4186231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1659763 |
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| End bp | 1662456 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638071427 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_678045 |
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| Protein GI | 110637838 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.162327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACA AAATCGGTAC ATTAAAATTA AGCGGGCTTG AGCCGCTTAT TGTTGATAAA
GGTTCCATCT TCGTAAACAT TGGTGAACGT ACCAACGTTA CTGGTTCCGC GAAGTTTTTA
CGGTTAATAA AAGAAAACAA ATACGAAGAA GCCATTGAAG TTGCGTTAGA CCAGGTTCGT
GGCGGAGCAC AGGTGATTGA CGTCAATATG GATGAAGGGA TGCTGGATAG TGAAGCCGCT
ATGGTGCGCT ATTTAAATCT GCTTGCTTCC GAACCGGAGA TCTCGCGTGT ACCGGTAATG
GTCGATTCGT CTAAATGGCA CGTGATCGAA GCCGGTTTGA AATGTATTCA GGGAAAAGGT
ATTGTGAACT CCATCAGCTT AAAGGCCGGT GAAAAAGAAT ATCTGGAACA GGCCCGTAAA
ATTAAAAAGT ATGGTGCAGC GGTAGTTGTT ATGGCCTTCG ACGAAGACGG ACAAGCAGAT
ACATACGATA GACGTATCAG TATTTGCGAA CGTTCGTATC GTTTGCTGGT AGATAAACTT
GATTTCAATC CGAATGACAT CATTTTTGAC CCGAATATTT TTCCTGTAGC GACCGGTATT
GATGAACATA AAAATTACGC GCTGGATTTC TTTAGAGCAA CGCGCTGGAT CCGGGAGAAC
CTTCCGGGTG CACACGTAAG CGGCGGTGTC AGTAACGTAT CGTTTTCATT CCGTGGAAAT
AATACCGTGC GTGAAGCCAT GCATTCCGTG TTTTTATATT ATGCCATCAA AGAAGGCATG
GATATGGGTA TTGTAAACCC TGCCATGCTT GAAGTATATG AGAATATTCC GAAAGATTTG
CTTGAACGTG TTGAAGATGT ATTGCTGAAT CGAAGAGACG ATGCAACTGA ACGTTTATTA
GAATATGCTG ATCGTGTTAA AGGAACAGAT AAAGTTCAGG TAAAAGATCT TGAATGGCGA
AAGGGGACGG TTGAAGAACG GTTGACATAC GCTCTGGTAA AAGGAGAAAT TGAATTCATC
GATGCGGATA CAGAAGAAGC GCGTCAGAAA TATGTGATTC CGCTGAAGGT AATAGAAGGC
CCGCTAATGG CAGGTATGAA CGTTGTTGGA GATTTGTTTG GCGAAGGCAA AATGTTCCTG
CCGCAGGTAG TGAAGAGTGC GCGTGTAATG AAAAAATCCG TTGCCTATTT AATGCCTTTT
CTGGAAGAAG AAAAAGCGAA GAACGGAGAT CAGCGAAATG CCGGCAAGAT CTTAATGGCT
ACCGTTAAAG GCGACGTACA CGATATCGGT AAAAACATTG TTGGTGTTGT ATTGGCATGT
AATAATTATG ACATCGTTGA TATCGGAGTT ATGGTGCCGG CTGCAAAAAT ACTGGAAACA
GCGATCAACG AAAAAGTTGA CATCATCGGA CTTTCCGGGT TAATCACGCC GTCGCTGGAT
GAAATGGTAA CCGTTGCGAA AGAAATGGAA CGTGCCGGAT TTAAAATCCC TCTACTGATA
GGAGGAGCTA CAACGTCACG TATTCATACA GCTGTTAAAA TTGATCCGAA CTACAGCGGA
GCCGTTATTC ATGTGCTTGA CGCATCTAAA GGAGTGCCGG TTGCCAGTAA GCTGCTGAGT
GATGATCAGA GCGAAGCATT TGTAAAAGAA ATGAAAGCAG AATATGCCCA GCTCCGGGAA
GATTATGCAA ACAAACGTGA AGATAAAAAT TACGTAACAT ATAAAGAGGC ATGTGCCAAT
AAATATCAGG TGGATTGGGA GACGGCTAAG ATCGTTACAC CAAAACAGTT GGGCAATTAC
GCACTGAATG ATTTTTCGCT GGAAGAAATT CGGGAATATA TTGACTGGAC ACCTTTCTTT
CAGACCTGGA TGTTGAAAGG CAAGTATCCG AAAATATTAA AAGATCCGGT AATTGGTGTT
GAAGCAACCA AATTGTTTGA AGATGCCAAT GTCTTGTTAG ATAAAGTGAT TGCTGAAAAA
TGGCTTACGG CAAACGCTGC ATATGGTATG TACCCCGCAG CTGTGGTAAA CGATGATACC
GTTGAAGTCT ATTCCGATGA AACCCGAACA ACGGTGTTAA AGAAATTTCA TTTCTTAAGA
CAGCAAGGTA AAAAAGGTAA AGATGTACCG AACATTTCGT TGGCAGATTT CATTGCACCG
AAAGAATCCG GTAAGTTGGA TTACATCGGT ATGTTTGCTG TAACGGCGGG CATGGGCATA
GAGCCACATC TGGAGCGCTT TGAAAAAGAT CACGATGATT ATAACAGCAT TATGCTGAAA
GCGATTGCCG ATCGGTTGGC AGAAGCGTTC GCAGAATGTC TGCACGCAAA AGTCCGCAAA
GAATATTGGG GCTATGCATC CGATGAAACA TTGGATAATG AAGAATTAAT TAAAGAATCA
TACATCGGTA TTCGCCCGGC ACCAGGTTAT CCTGCCTGTC CCGATCATAC AGAAAAACCG
GACCTGTTTA AATTACTTGA TGCAACAAAT AAGACAGGCA TCATTTTAAC GGAGAGCATG
GCTATGTATC CAGCATCTTC AGTTTCAGGA TTTTATTTTG CCAATGCAGA CGCCAAATAT
TTTGGTCTTG GAAAGGTGGC AAAAGATCAG GTTGAGGCCT ATGCAAGCCG CAAAAACATG
AATCTGTCGA CCATGGAAAA ATGGCTGGCG CCTAATCTTA CATACGATAT TTGA
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| Protein sequence | MSHKIGTLKL SGLEPLIVDK GSIFVNIGER TNVTGSAKFL RLIKENKYEE AIEVALDQVR
GGAQVIDVNM DEGMLDSEAA MVRYLNLLAS EPEISRVPVM VDSSKWHVIE AGLKCIQGKG
IVNSISLKAG EKEYLEQARK IKKYGAAVVV MAFDEDGQAD TYDRRISICE RSYRLLVDKL
DFNPNDIIFD PNIFPVATGI DEHKNYALDF FRATRWIREN LPGAHVSGGV SNVSFSFRGN
NTVREAMHSV FLYYAIKEGM DMGIVNPAML EVYENIPKDL LERVEDVLLN RRDDATERLL
EYADRVKGTD KVQVKDLEWR KGTVEERLTY ALVKGEIEFI DADTEEARQK YVIPLKVIEG
PLMAGMNVVG DLFGEGKMFL PQVVKSARVM KKSVAYLMPF LEEEKAKNGD QRNAGKILMA
TVKGDVHDIG KNIVGVVLAC NNYDIVDIGV MVPAAKILET AINEKVDIIG LSGLITPSLD
EMVTVAKEME RAGFKIPLLI GGATTSRIHT AVKIDPNYSG AVIHVLDASK GVPVASKLLS
DDQSEAFVKE MKAEYAQLRE DYANKREDKN YVTYKEACAN KYQVDWETAK IVTPKQLGNY
ALNDFSLEEI REYIDWTPFF QTWMLKGKYP KILKDPVIGV EATKLFEDAN VLLDKVIAEK
WLTANAAYGM YPAAVVNDDT VEVYSDETRT TVLKKFHFLR QQGKKGKDVP NISLADFIAP
KESGKLDYIG MFAVTAGMGI EPHLERFEKD HDDYNSIMLK AIADRLAEAF AECLHAKVRK
EYWGYASDET LDNEELIKES YIGIRPAPGY PACPDHTEKP DLFKLLDATN KTGIILTESM
AMYPASSVSG FYFANADAKY FGLGKVAKDQ VEAYASRKNM NLSTMEKWLA PNLTYDI
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