Gene CHU_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1416 
Symbol 
ID4184258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1645993 
End bp1646661 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content38% 
IMG OID638071409 
Producthypothetical protein 
Protein accessionYP_678027 
Protein GI110637820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.154846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0419171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT ACCAGAAAGT ATTAATTATA GCATTAGTAG CAATTTTATT GCCGTTTAGT 
AAGTCTGAAG CCCTTGTGCA GGGTGCAAAA GACGGAGAAA TACCTCAATT AAAGAAAATT
GCAGGTTTGA ATCCTTCTGT TTATGCATAT GCACTAAAAG GCTTTAACTC CATTCAGGAT
TCTTTGCATA AGAAATTCAG ATATCTTGCT GTGGTAGATT TCTCTAAGCC TTCAACAGAA
AGAAGATTTT ATCTGATTGA TCTGACAGAT ACTTCTTTAG TGTGTACAGA CTATGTATGC
CATGGAAAAC ATACAGGCGA AAATTTCGCA ACGAGTTTTT CAAATGAAAT AGAGTCAAAT
AAATCAAGTC TTGGTTTTTA TATGTTATCA GAAACATATA CAGGCCAGCA TGGCTTGTCT
ATCCGCATGG ATGGCCTTGA CAAAGGTTTT AATGATAATG CACGTAAACG CGCTATCGTA
ATGCACACCG CGGATTATGC AGACGAAAAG TTATGTAAAT CACAGGGAAG ACTGGGACGT
AGCCTGGGCT GTCCGGCTTT ACCGGTATCG ACCTTTACAA CGATCGCTCC GCAGGTTGCA
AACAATGCCT TGATTTTTCA CTACTATCCC GATAACAATT ATTTAAACAC TTCAGTTTGG
TTGCATTGA
 
Protein sequence
MKTYQKVLII ALVAILLPFS KSEALVQGAK DGEIPQLKKI AGLNPSVYAY ALKGFNSIQD 
SLHKKFRYLA VVDFSKPSTE RRFYLIDLTD TSLVCTDYVC HGKHTGENFA TSFSNEIESN
KSSLGFYMLS ETYTGQHGLS IRMDGLDKGF NDNARKRAIV MHTADYADEK LCKSQGRLGR
SLGCPALPVS TFTTIAPQVA NNALIFHYYP DNNYLNTSVW LH