| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1415 |
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| Symbol | pacL |
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| ID | 4184257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1643094 |
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| End bp | 1645793 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071408 |
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| Product | cation-transporting ATPase, calcium-transporting ATPase |
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| Protein accession | YP_678026 |
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| Protein GI | 110637819 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.389752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.069805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTA AATACCCCTT CGAAAATCCG TTTTCCGTAT CGGCAGATAC ACTTATTAAT
GACTTTCAAA CAAATACCCA GTCTGGTTTA ACAACCAGTG AAGCAGAAAA CAGAATAAAA
GAATTCGGAC AGAATATTTA TCAGGTTCAG AAACAAAAAA GTATCTGGCT GATGCTGTTA
TTACAGTTTA AAAGTCCGAT CGTTTATCTG CTTCTTGCTG CGGCAGCTGT TTCTTTATAC
TTTAAAGATG TTATTGAAAC TGCTGCAATC CTTGTCGTAA TTGTGGTTAA TGCCATCATC
GGTTTTTTAA TGGAGCTTCA GGCACGCAGT TCAATGAATG CGTTGAAAGA AATGGACGTG
ATCAAAACAA ATGTGATCCG CGATGGAAAG AAACAAGAGA TCCCTTCTGA AAATATTACA
CCCGGAGATA TTGTATTGCT GGAAGCCGGT GATGTTGTTC CGGGCGACGG ACGTATCATT
GAAGCGAACC AGCTCAAATG TGATGAATCT TCTCTGACCG GTGAATCGTT ACCTGCGGAA
AAAAAGACCG AGGAATTACA AGCCAATACT GCGTTGGGAG ATCAACACAA TATGGTTTTC
AAAGGTACAT CGGTTGTGAA TGGAAACGGC AAAGCACTTA TTACTGGTAT AGCCGAACAT
ACACAGCTCG GTACTATTAC GTCTCTGGTA GAAAAGTCGG AAGATAAACA AACACCCTTA
GATCAAAAAA TAAATGTACT AAGTAAAAAA CTGATCTGGA TCACACTGAC AATGACTGCT
ATATTTGCTG CAACAGGTGT GATACAGGGC AAAGAATGGG TGTTGATTTT CGAAAGCTCT
ATAGCCCTTG CGGTGGCAGC TTTCCCGGAA GGACTTCCGA TTGTTGCCAC CATTGCGCTT
TCGCATGGCA TGCTCCTTAT GGCTAAGAGG AATGCAATCG TAAAAAAACT TTCTGCCGTG
GAAACGCTTG GCGGTACACG CGTGATTCTG ACAGATAAAA CAGGCACACT TACTGAAAAT
AAAATTTATG TAGAAACCTT TTCTTTCCCG GAAGAAAAAA TAGCGGTAAA GATTAACAAT
AACACCGTAA ACTACCCGGA TAAACAGATA GAAAAGAGCA AAGAGAATTT TGAAAAAATG
CGCCTGGTGG GTGCGTTGTG TAACAATGCT CCCCTTGAGC AGCAGGAACA GAAAGACGAT
CAGAAACCTG CTGCGGGCGA CCCGATTGAC ATTGCACTGA TTTTGCTGGC AAATGTTTCA
GGAACATCTG CAAAAGACTT ACAAGGGCAA TTTGAACGTA TTGGCGAAGT GCCTTTTAAT
TCTGATATCA AGATTATGGG AACGCTGCAT AATTCTCCAA ACGGGAAATT TGTAGCTGCT
AAAGGTTCGG TAGAACATCT GTTAAACAAC TGCAGCAAAA TTCAATATGG CAGCGAAATT
AAAGATCTGA ATGATGAACA GAAAAAAGGC ATTCTGGATG AATCTGAAAA AATGGCGGCA
GACGGACTGC GTGTTATAGC GTTTGCTTAT CGGGAAGGTC AGGATATCAA TACAGACAAT
TATTTATCGG AACTCATCCA CGTAGGTATG ATCGGGTTTC TGGACCCGCC GCGTATGGAC
ATTAAAGATG CTATTTTGCG TTGCAGAAAT GCGGGCATAC GCATTGTTAT GATCACTGGT
GACCACCCGA TGACAGCCTT AAATATTGCA AAAAAAATCG GACTGGTAGA TGAAAATGAA
CAGCATGTAA TTATCGGCCA GGATCTGCCG GAGGCAGAAG CGGTAACAGA TGAATGGAGA
GAGAAAATTC TTGCGACTTC TGTTTTTGCA CGTACTACAC CAAAACAAAA GCTGGAGATT
GTTGAAGCCT TTCAAAAAGC CGGAAATATT GTTGCCATGA CCGGTGATGG CATAAACGAT
GCGCCGGCGC TGAAAAAAGC AGACATTGGT ATTGCTATGG GACTGCGCGG CACACAGGTT
GCAAAAGAAA CAGCAGGCAT TGTATTGAAG GATGATTCCT TTACATCGAT AGCTGAAGCA
GTAGCACATG GCAGAGAAAT TTTTGACAAC ATTAAAAAAT TTATTGTGTA TTTATTCTCC
TGCAATTTAA GCGAGATCTT TATTGTAACC ATACTTGGTT TTATTACACC GCTCTCTACC
TTGTTACCGC TACAGATTTT ATTCCTGAAC ATGGTAACCG ATGTGTTTCC TGCCCTTGCA
TTAGGCGTAG GCAAAGGCGA TGAGAAAGTA ATGGAAAAAC AACCGCGGGA TGCAAAAGAA
AATATACTTA CCAATAAAGA CTGGATAAGA ATTGCATTGT ACTCCTTACT TATTTCTGTA
TCGGTTATCA TTTCTGTGTT ATATTGCAAT CACATTATTG AATCAGACCA TAAAATTGCT
AACAATGCTG CATTCCTTAC ATTAGCCTTT TCACAACTTT TCCATGTATT AAACATGTCG
TCCTTCAGTT CAAAAATGTT CCTGAACGAT ATAACAAAAA ATATATTTGT GTGGCTGGCA
ATTTTATTAT GTGCAGGTAT TATGATCACG GTATATGCAA TCCCGTATAC ACGCCTTATA
CTGGGTCTTG AACTGTTACC AGCAGAAGCT GTAGTCGTTT CAATCGCATG TAGTTTCATT
CCGGTGGTAG TAGTTCAAAC ATATAAACTA TTCTACAAAA TCACTAAAAG CAAAAAATAA
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| Protein sequence | MSIKYPFENP FSVSADTLIN DFQTNTQSGL TTSEAENRIK EFGQNIYQVQ KQKSIWLMLL
LQFKSPIVYL LLAAAAVSLY FKDVIETAAI LVVIVVNAII GFLMELQARS SMNALKEMDV
IKTNVIRDGK KQEIPSENIT PGDIVLLEAG DVVPGDGRII EANQLKCDES SLTGESLPAE
KKTEELQANT ALGDQHNMVF KGTSVVNGNG KALITGIAEH TQLGTITSLV EKSEDKQTPL
DQKINVLSKK LIWITLTMTA IFAATGVIQG KEWVLIFESS IALAVAAFPE GLPIVATIAL
SHGMLLMAKR NAIVKKLSAV ETLGGTRVIL TDKTGTLTEN KIYVETFSFP EEKIAVKINN
NTVNYPDKQI EKSKENFEKM RLVGALCNNA PLEQQEQKDD QKPAAGDPID IALILLANVS
GTSAKDLQGQ FERIGEVPFN SDIKIMGTLH NSPNGKFVAA KGSVEHLLNN CSKIQYGSEI
KDLNDEQKKG ILDESEKMAA DGLRVIAFAY REGQDINTDN YLSELIHVGM IGFLDPPRMD
IKDAILRCRN AGIRIVMITG DHPMTALNIA KKIGLVDENE QHVIIGQDLP EAEAVTDEWR
EKILATSVFA RTTPKQKLEI VEAFQKAGNI VAMTGDGIND APALKKADIG IAMGLRGTQV
AKETAGIVLK DDSFTSIAEA VAHGREIFDN IKKFIVYLFS CNLSEIFIVT ILGFITPLST
LLPLQILFLN MVTDVFPALA LGVGKGDEKV MEKQPRDAKE NILTNKDWIR IALYSLLISV
SVIISVLYCN HIIESDHKIA NNAAFLTLAF SQLFHVLNMS SFSSKMFLND ITKNIFVWLA
ILLCAGIMIT VYAIPYTRLI LGLELLPAEA VVVSIACSFI PVVVVQTYKL FYKITKSKK
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