Gene CHU_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1411 
Symbol 
ID4184253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1636235 
End bp1637839 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content47% 
IMG OID638071404 
ProductNAD(FAD)-dependent dehydrogenase 
Protein accessionYP_678022 
Protein GI110637815 
COG category[R] General function prediction only 
COG ID[COG2509] Uncharacterized FAD-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.142599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAC TGGTTGAAAT TGCGCTTCGC CCTGAAGACG CTGTTCGTGA TGAACAAATT 
AAACGAGCAA TCAAAGCTCA GACTTCTTAT CAATCCCTCG ATTTTCAATA CCGGATCAAA
CGTCGTTCCA TCGATGCGCG CGGCCGTCAG GTATTGGTTC GCATGGGCGT AGAAGTATTT
GATAAAGGAG AGCTGCTTCC CCCGCTTTTA GCGCTGCATA AACAAATATA TAAGCCAGCA
AACGATAGTA AACATCAGGT TGTGATCATA GGAGCAGGTC CGGCTGGTTT ATTTGCCGCC
TTGCGGTTAT TGGAGTACGG CATTAAGCCG GTTGTTATTG AACGCGGTAA AGACGTACGT
GCACGCAGAA GAGACCTGGC AGCCATTAAC AAAGATCATA TTGTAAATCC GGAATCAAAT
TACTGTTTTG GAGAAGGCGG CGCGGGTACG TATTCCGATG GGAAATTATA TACCCGTTCC
AAAAAGCGCG GCGACATCCG AAAAGTATTG GAGGTACTGG TAGCACATGG TGCTACGGAA
GATATTCTGG TAGATGCGCA TCCGCACATT GGTACCAATA AATTACCTGT ATTGGTTACA
GATCTTCGTG AAACCGTTAA AGCATATGGC GGTGAAGTAT TGTTTGATAC ACGCGTTGAA
AAACTCATTA TACGAGATGG CGTTTGTGCG GGCGTGATTA CACACAATAA TGAAAAAATT
GAAGGCATAG CAACCATACT TTGTACGGGA CATTCAGCGC GCGATATTTT TTATATGCTG
CATGAGCAAG GCATTCATAT TGAAGCGAAA CCCTTTGCCT TAGGTGTACG GATTGAGCAT
CCGCAAACGT TGATCGATAC GGTGCAATAT CATTGTTCCG GTGATCGTGG CGATTATCTT
CCGGCAGCAG CGTATTCATT GGTTACACAA ACGCAATATC AAAAAGTAGA ACGCGGTGTA
TATTCCTTCT GTATGTGTCC GGGCGGCTTT ATTGTACCAG CGGCTACCGC ACCGGGAGAA
CTTGTGGTTA ACGGGATGTC ACCAAGTAAA CGTGATTCAA AGTTTGCCAA TTCAGGCATG
GTAGTAGCGG TTGAACTGGA CGATATAAAA GAATTCAGTA AGCATGGCCC CTTTGCTGCA
CTTGAATTTC AGAAAAGCGT AGAACAGAAT GCCTGGGCTG TTGGTGGTAA AACACAGACA
GCGCCGGCAC AGCGTGTCGC AGATTTTATT CAGAATAAAT ATTCTTCCTC TCTGCCGGAT
TGTTCCTACC AGCCAGGTTT AAAGAGCGCC AGGATGGACG ATGTGTTGCC GGATATGATC
GCGCAGCGCC TCCGTCAGGG ATTAAAACAA TTCGAACATA AGATCAAAGG GTATACCAGC
AACGAAGGGT TGCTGATCGG TGTAGAAAGC CGTACATCAT CCCCCGTATT TGTTCCAAGA
GATAAAGAAA CCTTACAGCA CATTACCTTA AAAGGCCTGT ATCCATGCGG CGAAGGTGCC
GGTTACGCAG GCGGAATCAT GTCGGCCGCT ATGGATGGGG AGAGCTGTGC GTTACGGATC
GCACAGGGGC TGGGGTTGGC AGCAGTGGAA ATAAATTCCA AATAA
 
Protein sequence
MSKLVEIALR PEDAVRDEQI KRAIKAQTSY QSLDFQYRIK RRSIDARGRQ VLVRMGVEVF 
DKGELLPPLL ALHKQIYKPA NDSKHQVVII GAGPAGLFAA LRLLEYGIKP VVIERGKDVR
ARRRDLAAIN KDHIVNPESN YCFGEGGAGT YSDGKLYTRS KKRGDIRKVL EVLVAHGATE
DILVDAHPHI GTNKLPVLVT DLRETVKAYG GEVLFDTRVE KLIIRDGVCA GVITHNNEKI
EGIATILCTG HSARDIFYML HEQGIHIEAK PFALGVRIEH PQTLIDTVQY HCSGDRGDYL
PAAAYSLVTQ TQYQKVERGV YSFCMCPGGF IVPAATAPGE LVVNGMSPSK RDSKFANSGM
VVAVELDDIK EFSKHGPFAA LEFQKSVEQN AWAVGGKTQT APAQRVADFI QNKYSSSLPD
CSYQPGLKSA RMDDVLPDMI AQRLRQGLKQ FEHKIKGYTS NEGLLIGVES RTSSPVFVPR
DKETLQHITL KGLYPCGEGA GYAGGIMSAA MDGESCALRI AQGLGLAAVE INSK