Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1411 |
Symbol | |
ID | 4184253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1636235 |
End bp | 1637839 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638071404 |
Product | NAD(FAD)-dependent dehydrogenase |
Protein accession | YP_678022 |
Protein GI | 110637815 |
COG category | [R] General function prediction only |
COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.142599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAC TGGTTGAAAT TGCGCTTCGC CCTGAAGACG CTGTTCGTGA TGAACAAATT AAACGAGCAA TCAAAGCTCA GACTTCTTAT CAATCCCTCG ATTTTCAATA CCGGATCAAA CGTCGTTCCA TCGATGCGCG CGGCCGTCAG GTATTGGTTC GCATGGGCGT AGAAGTATTT GATAAAGGAG AGCTGCTTCC CCCGCTTTTA GCGCTGCATA AACAAATATA TAAGCCAGCA AACGATAGTA AACATCAGGT TGTGATCATA GGAGCAGGTC CGGCTGGTTT ATTTGCCGCC TTGCGGTTAT TGGAGTACGG CATTAAGCCG GTTGTTATTG AACGCGGTAA AGACGTACGT GCACGCAGAA GAGACCTGGC AGCCATTAAC AAAGATCATA TTGTAAATCC GGAATCAAAT TACTGTTTTG GAGAAGGCGG CGCGGGTACG TATTCCGATG GGAAATTATA TACCCGTTCC AAAAAGCGCG GCGACATCCG AAAAGTATTG GAGGTACTGG TAGCACATGG TGCTACGGAA GATATTCTGG TAGATGCGCA TCCGCACATT GGTACCAATA AATTACCTGT ATTGGTTACA GATCTTCGTG AAACCGTTAA AGCATATGGC GGTGAAGTAT TGTTTGATAC ACGCGTTGAA AAACTCATTA TACGAGATGG CGTTTGTGCG GGCGTGATTA CACACAATAA TGAAAAAATT GAAGGCATAG CAACCATACT TTGTACGGGA CATTCAGCGC GCGATATTTT TTATATGCTG CATGAGCAAG GCATTCATAT TGAAGCGAAA CCCTTTGCCT TAGGTGTACG GATTGAGCAT CCGCAAACGT TGATCGATAC GGTGCAATAT CATTGTTCCG GTGATCGTGG CGATTATCTT CCGGCAGCAG CGTATTCATT GGTTACACAA ACGCAATATC AAAAAGTAGA ACGCGGTGTA TATTCCTTCT GTATGTGTCC GGGCGGCTTT ATTGTACCAG CGGCTACCGC ACCGGGAGAA CTTGTGGTTA ACGGGATGTC ACCAAGTAAA CGTGATTCAA AGTTTGCCAA TTCAGGCATG GTAGTAGCGG TTGAACTGGA CGATATAAAA GAATTCAGTA AGCATGGCCC CTTTGCTGCA CTTGAATTTC AGAAAAGCGT AGAACAGAAT GCCTGGGCTG TTGGTGGTAA AACACAGACA GCGCCGGCAC AGCGTGTCGC AGATTTTATT CAGAATAAAT ATTCTTCCTC TCTGCCGGAT TGTTCCTACC AGCCAGGTTT AAAGAGCGCC AGGATGGACG ATGTGTTGCC GGATATGATC GCGCAGCGCC TCCGTCAGGG ATTAAAACAA TTCGAACATA AGATCAAAGG GTATACCAGC AACGAAGGGT TGCTGATCGG TGTAGAAAGC CGTACATCAT CCCCCGTATT TGTTCCAAGA GATAAAGAAA CCTTACAGCA CATTACCTTA AAAGGCCTGT ATCCATGCGG CGAAGGTGCC GGTTACGCAG GCGGAATCAT GTCGGCCGCT ATGGATGGGG AGAGCTGTGC GTTACGGATC GCACAGGGGC TGGGGTTGGC AGCAGTGGAA ATAAATTCCA AATAA
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Protein sequence | MSKLVEIALR PEDAVRDEQI KRAIKAQTSY QSLDFQYRIK RRSIDARGRQ VLVRMGVEVF DKGELLPPLL ALHKQIYKPA NDSKHQVVII GAGPAGLFAA LRLLEYGIKP VVIERGKDVR ARRRDLAAIN KDHIVNPESN YCFGEGGAGT YSDGKLYTRS KKRGDIRKVL EVLVAHGATE DILVDAHPHI GTNKLPVLVT DLRETVKAYG GEVLFDTRVE KLIIRDGVCA GVITHNNEKI EGIATILCTG HSARDIFYML HEQGIHIEAK PFALGVRIEH PQTLIDTVQY HCSGDRGDYL PAAAYSLVTQ TQYQKVERGV YSFCMCPGGF IVPAATAPGE LVVNGMSPSK RDSKFANSGM VVAVELDDIK EFSKHGPFAA LEFQKSVEQN AWAVGGKTQT APAQRVADFI QNKYSSSLPD CSYQPGLKSA RMDDVLPDMI AQRLRQGLKQ FEHKIKGYTS NEGLLIGVES RTSSPVFVPR DKETLQHITL KGLYPCGEGA GYAGGIMSAA MDGESCALRI AQGLGLAAVE INSK
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