| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1409 |
|---|
| Symbol | |
|---|
| ID | 4184251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1633245 |
|---|
| End bp | 1634237 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638071402 |
|---|
| Product | tryptophan 2,3-dioxygenase |
|---|
| Protein accession | YP_678020 |
|---|
| Protein GI | 110637813 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.932006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.40578 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGAC ACGGGAGCGA ATCCGGAAAT AATATACAGG AATTAATAGA ACAGCTGACC
AGCCATTTCG AAAAGGATGG ACAGGATGTT GCTACGCACC TGGAAGGTCT GTTGAATTCC
AACTATTTAA AGTACTGGGA TTATATCCGT CTGGAGAGTT TGCTTACACT GCAAAACCCC
AGAACGCCTT ACCCGGATGA AATGGTATTC ATTGTATACC ACCAGATCAC GGAGCTGTAT
TTTAAATTGG TGATGCATGA GCTGAACCAG GTTAAAACAG CGGATCAGTT AACAGGCCCA
GTATTTTTAA AGCGCATTGA ACGCTGTAAC TGGTACTTCG GCCAATTGAT CAGTTCATTT
GATATTATTT CTGTTGGTTT GGATCAGGAT CAGTTTTTAA AATTCCGTGT CGCATTAACA
CCTGCATCCG GCTTTCAATC GGTGCAATAC AGAATGGTAG AAGTAGCATG CACGGATCTG
ATCAATCTGG TTCATGCAGA TACACGCGAT AAGTACGACG ACTATTCAAC CATTGAAGAA
TTATTTGATG GCTTGTATTG GAAAAAAGGA GCAACGGATT CAAAAACCGG ACAGAAAACA
TTAACACTGC GTCAATTTGA AGAAGAATAT ACAGCCAGAT TGATACAGTT AGCGTATGAA
TATAAGTCAC GCAATGTATG GTCGGTATAC AAGCGTTTAT CTCTGGAAGA ACAGGCAGAC
CCGGTTATTC AGGCTGCGCT AAAACAACTG GATCAGCACA TTAATATTGA CTGGCCCTTG
ATGCATTATA AATATGCTCT GGGTCATTTG ATCAAACATA AGAAATTCCT GGAAGCTACC
GGAGGCACGA ATTGGAAAGA ATACCTTCCG CCGCGTTTTC AGAAAGTAAT CTTTTTCCCT
GCTTTATATA CCAAAGATGA ACTGGATAAC TGGGGAAAAA ATTGGGTGGA AAAAGAAGTG
ATTTCAAAAA TTCAAGCTGC AAAACAAGTA TAA
|
|---|
| Protein sequence | MHGHGSESGN NIQELIEQLT SHFEKDGQDV ATHLEGLLNS NYLKYWDYIR LESLLTLQNP
RTPYPDEMVF IVYHQITELY FKLVMHELNQ VKTADQLTGP VFLKRIERCN WYFGQLISSF
DIISVGLDQD QFLKFRVALT PASGFQSVQY RMVEVACTDL INLVHADTRD KYDDYSTIEE
LFDGLYWKKG ATDSKTGQKT LTLRQFEEEY TARLIQLAYE YKSRNVWSVY KRLSLEEQAD
PVIQAALKQL DQHINIDWPL MHYKYALGHL IKHKKFLEAT GGTNWKEYLP PRFQKVIFFP
ALYTKDELDN WGKNWVEKEV ISKIQAAKQV
|
|---|
| |