| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1404 |
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| Symbol | gnd |
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| ID | 4185300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1627691 |
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| End bp | 1629574 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638071397 |
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| Product | 6-phosphogluconate dehydrogenase (decarboxylating) |
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| Protein accession | YP_678015 |
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| Protein GI | 110637808 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0362] 6-phosphogluconate dehydrogenase
[COG3265] Gluconate kinase |
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| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating
[TIGR01313] carbohydrate kinase, thermoresistant glucokinase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.214778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.818637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATA GAATATATAT TGTTATGGGC GTTTCCGGTT GTGGTAAAAC AACGATTGGT
ACGCTGCTGG CAGAAACATT AGGAATTAAC TTTTACGATG GCGATGCTTT TCATCCCATA
TCAAATATTG AGAAAATGGC TGCGGGTATT CCACTTACAG ATGAAGATAG ATACAACTGG
CTGCTGGATA TTAATAAGCA GGCGAAAGAA TCCCTGAGTG AAGGCCATTC TGTTGTGTTT
GCCTGTTCTG CATTAAAAGA GTCTTATCGC AAATTATTAG CACAGCAGAT TGAAGATACC
ATCGTTTGGA TCTATTTAAA AGGAGACCTT GATACCATTC ATCTCAGAGT AAAAAATAGA
ACGGGACATT TTATGTCTCC GGCACTGTTA CAATCCCAAT TCAATATACT GGAAGAACCA
TCTTCCGCGA TGCATATTGA TACAGCATTA GATACAGATA CGATTATTCA TACAATTGTG
AAAAAACTTA CAAAATCAGC ATTCGGGTTG GTAGGCCTGG GTGTGATGGG CAAAAGCCTC
GCCCGAAATT TTGCAGCGAA CGGTGTAGCC CTATCTTTAT ACAATCGATT TGTAAAGGGT
TCAGAAGAGC AGGTGGCAGA AAAATGTATT GCTGAATACC CTGAACTTCA ATCGGCGAAA
GGCTTTGAAG ATTTGAAAAC ATTTGCTGCT TCCCTTGAAC AGCCGCGTAA AATTTTTCTG
ATGATTAAGG CCGGAGAAGA AACAGACACG TTTATTGAAG AACTTGTTCC GTATTTGAAC
GCAGGAGATG TATTGATTGA TGGCGGAAAT TCGTATTACG GTGACACAAA AAGACGTATT
GAGTTTTTAG CCCGGAAAGG AATATATTTT ATCGGAACAG GTGTTTCAGG CGGAGAGCAG
GGAGCGCTCA AAGGACCGTC TATTATGCCA TCCGGAGATC CTGATGCGTA TGCACTGGTT
GAAAAATACC TTACACTAAT TGCTGCGAAA GATAAGCAAG GGGAGTCATG CTGTACCTAT
ATCGGAAAAG ATGGATCAGG CCATTTTGTT AAAATGATTC ATAACGGAAT TGAATATGCT
GAAATGCAAT TGATCGCGGA AGTATATGCG TATTTAAGAT ATGCCATAAA AATCGAGCCG
ACTGAAATAG CTGCATTATT TACAGAATGG AACAGCGGTG AGTTAAACAG TTATCTGCTT
GGAATTACAG CAGCGCTTTT AATAAAAAAA GAAGGAGATG CTTGGCTGAT TGATCTGATC
TTAGACAAAG CGGGCAATAA AGGAACCGGG AACTGGGCCA CCATTGCGGC ATCTGAGCTC
GGACAACCTG CCACACTTAT TACATCCGCG CTGTTTGCCC GTTACGTTTC CACGATAAAA
GAACACATTC TTGTAAATAC ACAACCAGCT TCGGTATATC ATTTTAATAC AGCTGCATTA
TCGGAGATAA AAGATGCGTA TATGCTTGCG CGCATTGTTA ATCATCAGCA GGGATTTATG
CTGATCCATG AGGCTTCACA GAAATATGGG TGGGATCTGA ATTTTGCTGA GATTGCACGC
ATCTGGACGA ACGGCTGTAT TATCCGAAGT GCTTTTATGG AAGAGCTTAT TCCGGCATTA
AAAAAAGATT CAAACATCTT TACCCATCCT GCCATTTTAA AACAATTGAA AGATCTCAAG
CCTGCATTGA AAGCTTTTGC CGTGAATGCA CTGCAATATG ATCTTTCTGT ACCGTCGCAT
CTGGCAGCAC TTGATTACCT GAATGTGCTT TCAGGTAATT ACGCAACAGC AAATATCATA
CAGGCACAAC GCGATTTTTT CGGAGCACAT ACGTATCAGA AGATTGGAGA TAGTTCCGGC
AAGTATTATC ACACGGAATG GTAA
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| Protein sequence | MENRIYIVMG VSGCGKTTIG TLLAETLGIN FYDGDAFHPI SNIEKMAAGI PLTDEDRYNW
LLDINKQAKE SLSEGHSVVF ACSALKESYR KLLAQQIEDT IVWIYLKGDL DTIHLRVKNR
TGHFMSPALL QSQFNILEEP SSAMHIDTAL DTDTIIHTIV KKLTKSAFGL VGLGVMGKSL
ARNFAANGVA LSLYNRFVKG SEEQVAEKCI AEYPELQSAK GFEDLKTFAA SLEQPRKIFL
MIKAGEETDT FIEELVPYLN AGDVLIDGGN SYYGDTKRRI EFLARKGIYF IGTGVSGGEQ
GALKGPSIMP SGDPDAYALV EKYLTLIAAK DKQGESCCTY IGKDGSGHFV KMIHNGIEYA
EMQLIAEVYA YLRYAIKIEP TEIAALFTEW NSGELNSYLL GITAALLIKK EGDAWLIDLI
LDKAGNKGTG NWATIAASEL GQPATLITSA LFARYVSTIK EHILVNTQPA SVYHFNTAAL
SEIKDAYMLA RIVNHQQGFM LIHEASQKYG WDLNFAEIAR IWTNGCIIRS AFMEELIPAL
KKDSNIFTHP AILKQLKDLK PALKAFAVNA LQYDLSVPSH LAALDYLNVL SGNYATANII
QAQRDFFGAH TYQKIGDSSG KYYHTEW
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