| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1392 |
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| Symbol | |
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| ID | 4185288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1613232 |
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| End bp | 1616687 |
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| Gene Length | 3456 bp |
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| Protein Length | 1151 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638071385 |
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| Product | transglutaminase-like enzyme, cysteine protease |
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| Protein accession | YP_678003 |
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| Protein GI | 110637796 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases
[COG4196] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.284441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.67203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCA AAGTCGCAAT TAATCACAAA ACAACTTACT CGTACGACAG GCTTGTCAAC
CTGTCGCCCC ACGTATTCAG ATTAAGACCC GCAAGCCACT CAAGAACTGC TATTGAAGCA
TATTCATTCA AAGTCAGTCC GGCGAACCAC TTTATTAACT GGCAGCAGGA TCCTTTCGGC
AATTACCAGG CGCGCGTTGT CTTTCCTGAA CAGACGAAAG AATTAAGCAT CGAAGTGGAA
GTAATCGCAA ACATGGTTGT GATCAATCCA TTTGATTTTT TTGTGGAAGA ATATGCAAGC
AAATTTCCGT TCCAATACCA GGGGCAGTTG GTTAAAGAGC TGGCTCCGTA CCTGGAAGTA
AAGGATGACG GCCCCATGCT TGAGGAATGG ATGAAAACAG TCAGCAGAGA ATCTATTGAG
ATCGTTGATT TTCTTGTTTA CATCAATCAG AAAGTATATA AAGATATTAA CTATTCCATT
CGTATGGAAG CGGGTGTACA GACACCGGAT GAGACATTAG GATTAGCGCT GGGTTCCTGC
CGGGATTCGG CCTGGCTGCT GGTGCAGGCG CTTCGTAAAC TTGGCCTTGC TGCACGTTTT
GTTTCGGGGT ATCTTGTACA GTTAAAAGCA GATGTGGAAG CATTGGACGG ACCTTCCGGA
CCGCCGGCAG ATTTTACCGA TCTGCATGCC TGGGCGGAAG TATACATTCC CGGCGCAGGT
TGGGTTGGCC TGGATGCCAC TTCGGGCCTG TTTGCCGGCG AAGGACACAT TCCATTAGCC
TGTACGCCCG ACTATCTAAG TGCGGCGCCG GTGGTAGGTG CAACGAGCAA ATGTGAAACA
ACGTTCTCGT TCTCCAATGT TGTTACCCGT ATTCATGAAG ACCCGCGTGT AACCAAGCCC
TATTCAGAAG AAGAGTGGAC AGCGATCAAC GCACTGGGCA TGATGGTTGA TTATGAATAC
CAGAAGGGTG ATGTGCGTAT GACTATGGGC GGTGAACCTA CCTTCGTTTC CATCGATGAT
ATGGAATCTG CTCAATGGAA CACAGAGGCA GATGGTGTTG AAAAACGTAT CCTGTCACAT
GAATTATTAT TACGCCTGCG TGCTCGCTTT GCTCCTGCAG GCATGCTGCA TTACGGTCAG
GGAAAATGGT ATCCCGGTGA ACCGCTTCCT CGCTGGCAGT ACGGTTTGTT CTGGCGCAAG
GATGGTTTAC CGATGTGGAA GAACACCTCT TTACTGGCAC TGGAAAACGG AAAGAAAAAA
TATACGCATA TAGATGCCGA AGCATTTATT ACGGAGCTGA CGAAAACACT TGCAGTACCG
GCTTCAGACA TTTCTGCCCT ACATGAAGAT ATCTTTTATT TCCTGTGGAC AGAAGGAAAG
ATCCCGGTGA ATATTGATCC GATGAGTTTT ACATTAAAGG ATCCGATTGA GCGCAGAACT
TTAACTCAAC TGTTGGATAA AGGCCTGGAA ACACCGGCAG GTTTCGTATT GCCATTAGAA
TGGAGTCATA GTAAGAACTC CTGGAAAAGC GGTAAGTGGA GAATGAAACG TGAAGAGATA
TTTCTTATCC CCGGAAACTC CCCTATTGGT CTGCGATTAC CGTTAGATGC GCTTTCTAAA
ATTGCAGCTG AATATGAGCC TTATGAAATT GAGCGCAGCC TGTTTGAAAC AATTCCCTAT
CTGCAAAATG ATTATACAAA TACTGTACGT TCACGTTACG GCAGTATTGT AGAGCATGAG
GACACTCCCG CGCGCAGAAA AATCAATGAA GCTGTTGAAG AAGAAAAGCA ACATTCGAAA
CATAAAAAAA TTGAAAAAGA AATAAAAGAA GCCCAGCCAT TATTTTATGT TCCGCTTATA
AAGACGGCTT TATGTGTTGA AGTACGTGAT GGCATATTAT ATGTATTCTT ACCACCGCTT
AAATACATTG AACACTATCT TGACCTGCTT ACGTCGATTG AACTGACGGC GGAAAAACTT
CAGATCCCGG TTCGCATTGA AGGCTACGAA CCGCCACGCG ACAATCGTAT TGAACGGCTT
GTAGTATCCC CTGATCCGGG TGTGATTGAA GTAAATATTC ATCCGGCAAA AGACTGGAAG
GAAATGTCTT ATAATCTGGA AGTATTATAC CAGGAAGCAT TTAAGACCCG GTTAGGGACG
GAGAAATTCA TGCTTGACGG CAAGCATACC GGTACCGGCG GCGGTAACCA CATTACCATC
GGCGGTGCTA CGCCTGGCGA TAGCCCGCTG CTGCGCAGAC CGGATCTGCT TAGAAGTATC
ATAACGTTCT GGCAACACCA CCCAGGCCTT TCGTATTTAT TTTCAGGCGC GTTCATCGGT
CCTACCAGCC AGGCACCACG CTTTGATGAA GGCCGGGATG AAAAATTATA TGAGATGGAA
ATTGCCTTCG CGCAGATTCC GAATCACGAT GAAATTCCCT TCTGGCTTGT TGACCGTTTG
TTCCGTCACT TGCTGACCGA TATTACCGGA AACACCCATA GAGCAGAATT ATGTATTGAT
AAATTGTATT CCCCGGATTC TTCCAGCGGC CGCTTAGGTA TTCTCGAGTT CAGAGCATTC
GATATGCCGC CGCACAAAGA GATGAGCATG GTGCAGATGC TGTTAATCCG TACGCTGATC
GCCTGGTTCT GGAAGACGCC GTATAAAAAA GACCTTGTAC CGTGGGGTAC AGAGCTGCAT
GATAAATATA TGCTGCCGCA TTTTGTGGAG CAGGATATGA AAGACATTGT GCGTGACCTG
AATGATGCGG GATATCCATT CCAGATGAGC TGGCTGGCGC CGTTCTTCGA ATTCAGGTTC
CCGCATTACG GAACTGTTCA CATCAAAGAC GTGCAGATCC AGATCCGTAT GGGTATTGAG
CCATGGCATG TATTGGGCGA AGAAATGACC AGCTCGGGCA CCTCGCGTTA TGTAGACTCC
TCGTTAGAGC GCCTGCAGGT GAAGCTGACC AACATGAATG ACTCGCGGTA TGTGCTTGCC
TGCAATGGTT TCAAAGTGCC GTTAAAACCA ACGCCTGTAA AAGGTGAGTT TGTATGCGGG
ATCCGGTACC GGGCATGGCA GCCGCCATCC GCACTACACC CGACGATTGG GATTGATACA
CCGCTGGTAT TCGATCTGAT TGATACGTGG AACGGCAGAT CTGTTGGCGG ATGTACGTAT
CACATCGCAC ATCCGGGCGG AAGAAGTTAC GATACCTTCC CGATCAATAG CTATGAAGCG
GAATCAAGGC GTGTATCGCG CTTCTGGGAC AACGGGCATA CACAGGATCC GGTCCCTGCA
CCGGATTACG TTACATCAAC ACCGATCGGC CGTTATATGA TTGAGATAAA TCCTGGTTTG
AAACAGTTTG AATTAACAAA CATCGAAACA AATAAAGCCT ATCCGAATAC ACTGGATATG
CGTCTTTGCT GGAAAGCAAA GAATAAGGAC AGGTAG
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| Protein sequence | MAIKVAINHK TTYSYDRLVN LSPHVFRLRP ASHSRTAIEA YSFKVSPANH FINWQQDPFG
NYQARVVFPE QTKELSIEVE VIANMVVINP FDFFVEEYAS KFPFQYQGQL VKELAPYLEV
KDDGPMLEEW MKTVSRESIE IVDFLVYINQ KVYKDINYSI RMEAGVQTPD ETLGLALGSC
RDSAWLLVQA LRKLGLAARF VSGYLVQLKA DVEALDGPSG PPADFTDLHA WAEVYIPGAG
WVGLDATSGL FAGEGHIPLA CTPDYLSAAP VVGATSKCET TFSFSNVVTR IHEDPRVTKP
YSEEEWTAIN ALGMMVDYEY QKGDVRMTMG GEPTFVSIDD MESAQWNTEA DGVEKRILSH
ELLLRLRARF APAGMLHYGQ GKWYPGEPLP RWQYGLFWRK DGLPMWKNTS LLALENGKKK
YTHIDAEAFI TELTKTLAVP ASDISALHED IFYFLWTEGK IPVNIDPMSF TLKDPIERRT
LTQLLDKGLE TPAGFVLPLE WSHSKNSWKS GKWRMKREEI FLIPGNSPIG LRLPLDALSK
IAAEYEPYEI ERSLFETIPY LQNDYTNTVR SRYGSIVEHE DTPARRKINE AVEEEKQHSK
HKKIEKEIKE AQPLFYVPLI KTALCVEVRD GILYVFLPPL KYIEHYLDLL TSIELTAEKL
QIPVRIEGYE PPRDNRIERL VVSPDPGVIE VNIHPAKDWK EMSYNLEVLY QEAFKTRLGT
EKFMLDGKHT GTGGGNHITI GGATPGDSPL LRRPDLLRSI ITFWQHHPGL SYLFSGAFIG
PTSQAPRFDE GRDEKLYEME IAFAQIPNHD EIPFWLVDRL FRHLLTDITG NTHRAELCID
KLYSPDSSSG RLGILEFRAF DMPPHKEMSM VQMLLIRTLI AWFWKTPYKK DLVPWGTELH
DKYMLPHFVE QDMKDIVRDL NDAGYPFQMS WLAPFFEFRF PHYGTVHIKD VQIQIRMGIE
PWHVLGEEMT SSGTSRYVDS SLERLQVKLT NMNDSRYVLA CNGFKVPLKP TPVKGEFVCG
IRYRAWQPPS ALHPTIGIDT PLVFDLIDTW NGRSVGGCTY HIAHPGGRSY DTFPINSYEA
ESRRVSRFWD NGHTQDPVPA PDYVTSTPIG RYMIEINPGL KQFELTNIET NKAYPNTLDM
RLCWKAKNKD R
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