| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1383 |
|---|
| Symbol | |
|---|
| ID | 4185456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1605510 |
|---|
| End bp | 1606814 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638071377 |
|---|
| Product | transport protein |
|---|
| Protein accession | YP_677995 |
|---|
| Protein GI | 110637788 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.283032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTAT TCTATATTTG CGTTACCCTT TTTCTCGTTA TTTTAAATGG TTTTTTTGTT
GCCGCCGAAT TTGCCATTGT AAAAGTCCGT TCCTCACAAC TGGAAGTTAA AGCTGCAACG
GGCAACTCCC GGGCGCAGGT TTCTTTAACG ATTCTTGAAA ATTTAGATGC CTATTTATCT
GCTACTCAAT TTGGTATTAC TTTAGCCAGT CTCGGATTAG GCTGGGCAGG AGAGCGGGTT
GTAATGCCTT TGGTGCTGAT TGTGTTTGAC CTGATGTCAA TTTCATTGCC GGAATTATAC
ATGCATGAAA TTTCGATTGT TATCTCATTT ACATTCATAA CAATCATGCA CATTGTTTTT
GGGGAGCTTG CCCCTAAGTC AATTGCTATT CAGCGTGCAG AAGATGTTAC ATTAGCCATC
GCCTATCCAT TAAAAGCTTT TTATCTGATT TTCAAACCAT TTATCTTTTT ATTAAATGGC
TTTGCTACAT TCATCCTTAA GATCTCCGGA TTCGCCAGTG TTGGAGAAAA AGAACTGCAT
TCAGCGGAAG AACTTGAATT ACTTATTGAT CAGGGGAAAA TGAGTGGTGC ATTGAATCCA
AATGAGCATC AGCTTATTAA AAATGTCTTC GGCTTTATTG ATGTTACCGT TCGCCAGGTT
ATGACGCCGC GTACCAGCAT CAACGCAATT GATATTGATC TGCCGTTGGA ATATGTGTTG
AATAAAATAG TAAATGAAGG GTATTCAAGG CTACCTGTAT ATAAAGACAA CATCGATAAT
ATAATAGGTA TTTTATATAC CAAAGATCTG TTGAAGATGA TGAATAAAGG GGAACAGATT
AAGCTGCAGT CAGCCATGCG GCAGCCATAC TTTGTTCCTG AAACAAAAAA AATAAATGAA
CTGCTCAAAA ATCTTCAGGC TAAGCATTTA CACATGGCTA TTATTATAGA TGAGTTTGGT
GGTGTATCCG GAATCACTAC CATTGAGGAT ATCATTGAAG AACTGGTCGG TGAAATTCAG
GATGAGCATG ATGATGAAGC ACCTGTTGTA GAACAGGTTT CAGCGAATGA GTTTGTGGTA
AATGCGCTCG CAAACATACA GGATGTGAAT GAATGGTTAC CTGTTCCGTT ACCCGAAGGA
CCTGAATACG ATACCTTAGC CGGCTTACTC ATTAAGATCT TTACACGGAT TCCGGATTTA
AGTGAAAAAC TAACGTTTGA AGGATATCAA TTCACAATTT TGAAGAAAAA TAAACAAAGC
ATTTTACTGG TTAAAGTCCA TAAACTGGAA GAAGAAGCGC AATAA
|
|---|
| Protein sequence | MILFYICVTL FLVILNGFFV AAEFAIVKVR SSQLEVKAAT GNSRAQVSLT ILENLDAYLS
ATQFGITLAS LGLGWAGERV VMPLVLIVFD LMSISLPELY MHEISIVISF TFITIMHIVF
GELAPKSIAI QRAEDVTLAI AYPLKAFYLI FKPFIFLLNG FATFILKISG FASVGEKELH
SAEELELLID QGKMSGALNP NEHQLIKNVF GFIDVTVRQV MTPRTSINAI DIDLPLEYVL
NKIVNEGYSR LPVYKDNIDN IIGILYTKDL LKMMNKGEQI KLQSAMRQPY FVPETKKINE
LLKNLQAKHL HMAIIIDEFG GVSGITTIED IIEELVGEIQ DEHDDEAPVV EQVSANEFVV
NALANIQDVN EWLPVPLPEG PEYDTLAGLL IKIFTRIPDL SEKLTFEGYQ FTILKKNKQS
ILLVKVHKLE EEAQ
|
|---|
| |