| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1368 |
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| Symbol | dedA |
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| ID | 4185441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1591757 |
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| End bp | 1592422 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071362 |
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| Product | integral membrane protein |
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| Protein accession | YP_677980 |
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| Protein GI | 110637773 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0586] Uncharacterized membrane-associated protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.377957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACATTT TCGAATTATA CCATAACATT ACCAATCCAG AGGTAATCAT TAAAACAGGA
GGATTATTTT TAATCCTCCT TATCATTTTT GCGGAAAACG GCGTATTCTT TGGTTTCTTT
TTACCAGGCG ATACCTTGTT GTTTACGACC GGCTTATTGT CTTCTACAGG TAAGTTTGAT
GTGCCTATTG TAACCCTGCT GATCAGTATT TCCATAGCCG CCTATCTGGG CAGTTTATTC
GGATATTTTT TCGGGGAAAA AACAGGAAGC AGGCTCTTTA CCAAAGATGA TTCCCTTTTC
TTTAAGAAAA AATACATGTT TGCTGCTGAA GCATTCTTTA TCCGTTACGG TGCCGTAGCC
TTAATCATGG CCCGTTTCCT TCCTATTATC CGTACCTTTG CGCCAATTTT CTCTGGTATC
GTCCGGTATC CGTACGGTAA ATTCCTGCTT TATAACATCA TTGGCGGAAC ACTTTGGGTG
GTGAGCCTTG TTTACGGCGG CTACTTATTA GGACAGGTTG TTCCGGAATC AAAAGATTAT
CTGGAACATA TAATTCTTGG CATCATCATT ATAACCTGGA TACCTGTAGT TGTTACCTAT
ATAAAAGAGC GTAATCGGGC TAAAAAAGCA GCAGAAATTA CAACTGATTC AAATTCTGAC
CGTTGA
|
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| Protein sequence | MDIFELYHNI TNPEVIIKTG GLFLILLIIF AENGVFFGFF LPGDTLLFTT GLLSSTGKFD
VPIVTLLISI SIAAYLGSLF GYFFGEKTGS RLFTKDDSLF FKKKYMFAAE AFFIRYGAVA
LIMARFLPII RTFAPIFSGI VRYPYGKFLL YNIIGGTLWV VSLVYGGYLL GQVVPESKDY
LEHIILGIII ITWIPVVVTY IKERNRAKKA AEITTDSNSD R
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