| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1364 |
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| Symbol | dacB |
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| ID | 4183492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1585939 |
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| End bp | 1587390 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638071358 |
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| Product | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| Protein accession | YP_677976 |
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| Protein GI | 110637769 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.686247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAT TGCTTAAGAA GTCTGTTCCG TTGTTGTATA TATTATTTTT CCTCACGTCT
TTGGTACAGG CTCAGGTAAG CTGGAACAGT CAGCTAAAGC CTATTTTGGA AGATAGCTTG
CTTAAGCGCG CACAAGTGGG CATCTCTATC CGGGATATAA CTGCCAATAC ATTGGTATTT
GAAAAGAATG CACAGCAGGC CTTTACTCCG GCATCAAATC TGAAAATTGT AACAACTGCC
GCCGCACTGG AATTGCTAGG AAGCGATTAC CGGTTTGTGA CAAAGGTCTT ATATACCGGA
AATATTGAAG CGGGTAATTT TAGTGGTACC TTATATGTTA AGGGCAGCGG TGATCCGACT
CTGGGTTCCG ATAAGATGAC CGCTGCTGGC AGCTATCAGA CACTGGTGCG CAATTGGGTG
ACAGCGCTGA AGAATAAAGG CATTACAGCC TTTACAGGCA ATCTGGTTAT TGATCCGACA
CATTTTGGCT ACAATGCTAT CCCGAACGAT TACACCTGGG GTGACATCGG GAACTATTAT
GGAGCAGGGA GCTATGGATT AAACATCAAT GAAAATCAGA ATGTGATTGC TATTAAGCCC
GGGACTTCTT TAGGCAGCAT TACAACCATA CTAAGCATTA CACCCAAAGA CACATCCTGC
GTGTATGTAA ATCATGTTAA AACAGGTGCA GCGGGTTCAG GAGATCAGTC CATTGTATAT
TCCTCTCCGT ATAATCCTTT CGTTTACATT GAAGGCACCG TGCCTGCCGG TAGCACATAC
AATGTTAAAG CAAGTATTTC TGACCCTGCA CGCCTGCTGG GTCAATTACT GACTAAAGAA
ATGGCTGTAC AGGGTATTCA ATGGAAAGGA GAGATGCGGG TACTTACGCA GGATGATACG
ATTCCTGATA CAACAAATTG GATTACACTT CTGGAACAGC GTTCACCTAG GCTAAAGGAA
ATTGCTGTGT ATACAAATCT GGTCAGCAAT AATCTCTATG CAGAATGTCT GTTAAAAGAA
ATTGCGTTTA ATAAAACAGG TATTGGCTCA ACGGAACTTG GCGCAGCAGC AGTTAAAAAG
TACTTAAAGA AAATCGGAGT GGATACTTCG GGTTTGGTTC TGCGCGATGG TTCAGGCATG
TCGCCCTTCA ATTCTATATC ACCCAACCAG CTTACAAGTC TGTTGGCGAA ACAACAGGCC
AATACCGTGT TTGTAGGTTG TCTGCCAACA GCGGGTAAAG AAGGTACTGT AGCACATATC
TGTAAAGAAA GCGGCGGTAA GATACGGGTT AAAAGCGGAA CCATGAACGG CACTACCTGT
TACAGCGGAT ATGTTACGGC TGCTTCAGGT AAAGTATATG CGGTATCGCT TATGGTAAAT
AAACACGAAG CTAAAAATAG AACGATTCAG CGTGTGCTTG AAAAAGTACT GCTTAAAGTG
GCAGAGAATT AA
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| Protein sequence | MKILLKKSVP LLYILFFLTS LVQAQVSWNS QLKPILEDSL LKRAQVGISI RDITANTLVF
EKNAQQAFTP ASNLKIVTTA AALELLGSDY RFVTKVLYTG NIEAGNFSGT LYVKGSGDPT
LGSDKMTAAG SYQTLVRNWV TALKNKGITA FTGNLVIDPT HFGYNAIPND YTWGDIGNYY
GAGSYGLNIN ENQNVIAIKP GTSLGSITTI LSITPKDTSC VYVNHVKTGA AGSGDQSIVY
SSPYNPFVYI EGTVPAGSTY NVKASISDPA RLLGQLLTKE MAVQGIQWKG EMRVLTQDDT
IPDTTNWITL LEQRSPRLKE IAVYTNLVSN NLYAECLLKE IAFNKTGIGS TELGAAAVKK
YLKKIGVDTS GLVLRDGSGM SPFNSISPNQ LTSLLAKQQA NTVFVGCLPT AGKEGTVAHI
CKESGGKIRV KSGTMNGTTC YSGYVTAASG KVYAVSLMVN KHEAKNRTIQ RVLEKVLLKV
AEN
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