Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1349 |
Symbol | dnaB |
ID | 4183477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1573270 |
End bp | 1574811 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638071343 |
Product | primary replicative DNA helicase |
Protein accession | YP_677961 |
Protein GI | 110637754 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00606931 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.114778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTTG GAAAATCGAG GACAAAAGCT ACAGGGTTTG TAGCAAAAAA TACTATAGCA TCGGATCTGT TAGCCGGAAT GGGAAAGCTC CCGCCGCAGG CCATTGAAGT GGAAGAGGCT GTATTGGGGG CATTATTGCT GGAGAAAGAT GCGTTGACTT CAGTAATTGA TATTTTAAAA CCTGAAAGTT TTTACAAAGA AGCACATCAG AAAATATATT TAGCTGTTCT GGAATTGTTT GACCGTTCGG AACCGGTCGA TCTGATTACT GTTGTAAATC AGCTGCGTTC AAAAGCGGAG CTGGAATTTG TCGGCGGTGC GTATTACATT ACGGAATTGA CAACAAAGGT CAGTTCGGCA GCCAACATTG AATTTCACGC GCGTATCGTT TCAGAACAAT CGATCAAACG TAATCTGATT ACGATTGCTT CTAAAATTCA CAAAGACGCC TATGAAGATA CTACAGACGT TTTTGATTTA TTAGATAAAA CAGAAAAGGA CCTGTACGAA GTTTCTGAAG CCAACATCCG TAAGAATTAT TCTGAAATGA GAAGTTTGAT CGGACAGGCA TTGAAAGAGC TGGCAGAAAA GAAAGACCAG GCGGATGGAT TAACAGGCGT ACCAAGCGGT ATGTCTGATC TGGACCGTGT TACGTCTGGT TTTCAAAAAA GTGATCTGAT CATCATTGCT GCCCGTCCGG GTATGGGAAA GACAGCCTTT GTCTTGTCTG CCATGCGCAA TGCAGCAGTT GATTTTAAGA AACCTATTGC CTTATTCTCT TTGGAGATGT CGGCTGTTCA GCTTGTGAAT CGTTTAATTG CTTCTGAAGC TGAACTGGAT AGTTATAAAA TTAAAACAGG TAAGCTGGAA GAATACGAAT GGCAGCAATT GCACAGTAAA ATTTCTCCAT TAACTTCTGC TCCTATATAC ATTGATGATA CACCGGGTTT ATCGATCCGG GAACTGCGTA CCAAAGCGCG CCGCTTGAAA TCGCGTAATG ATATTCAGAT GATCATCATT GATTACCTGC AGCTGATGTC TGCTGATACA AGTAACAAAG GCGGCGGCGG TAACCGTGAA CAGGAAATCT CTGCGATCTC GCGTGCATTA AAAGGATTGG CCAAAGAACT GGAAGTGCCT GTAATTGCGC TTTCTCAGTT GAGTCGTGCG GTTGAATCCA GAGGAGGAGA TAAACGTCCG CAGCTTTCAG ATTTACGTGA ATCTGGTGCG ATTGAACAGG ATGCGGATAT TGTAATGTTC CTGTACCGTC CGGAATACTA TAAAATCGAA CAGGATGAAG AAGGAAATCC GACAGCAGGT ACAGGTGAAG TAATTATTGC CAAACACCGT AACGGTTCGC TGGAAACAGT TAAACTGAAA TACATCGGTA AGTTTACGAA ATTCGCCGAT CTTGGCGGAG ATTTCATTGA TATGGATAGC AATAACTGGA GCGGAGATCA GAATAAATTC TTCGGCGGAC AAACGCTGGG CAGTAAGGTC AACGACTTCG GCGGCGACGA CGACGGGCCG GCACCGTTTT AG
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Protein sequence | MEFGKSRTKA TGFVAKNTIA SDLLAGMGKL PPQAIEVEEA VLGALLLEKD ALTSVIDILK PESFYKEAHQ KIYLAVLELF DRSEPVDLIT VVNQLRSKAE LEFVGGAYYI TELTTKVSSA ANIEFHARIV SEQSIKRNLI TIASKIHKDA YEDTTDVFDL LDKTEKDLYE VSEANIRKNY SEMRSLIGQA LKELAEKKDQ ADGLTGVPSG MSDLDRVTSG FQKSDLIIIA ARPGMGKTAF VLSAMRNAAV DFKKPIALFS LEMSAVQLVN RLIASEAELD SYKIKTGKLE EYEWQQLHSK ISPLTSAPIY IDDTPGLSIR ELRTKARRLK SRNDIQMIII DYLQLMSADT SNKGGGGNRE QEISAISRAL KGLAKELEVP VIALSQLSRA VESRGGDKRP QLSDLRESGA IEQDADIVMF LYRPEYYKIE QDEEGNPTAG TGEVIIAKHR NGSLETVKLK YIGKFTKFAD LGGDFIDMDS NNWSGDQNKF FGGQTLGSKV NDFGGDDDGP APF
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