| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1345 |
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| Symbol | glgB |
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| ID | 4185850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1568115 |
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| End bp | 1570133 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638071339 |
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| Product | glycogen branching protein |
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| Protein accession | YP_677957 |
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| Protein GI | 110637750 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00189715 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.1395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGA AAAAAGGAAT CGCCCTAATT GAAGACGACC CATGGCTGGA GCCCTATGAA
GCTGAAATTC AAGATCGCAT TATCCGGTAT AAACGCGCAG TAAAAGAAAT TAAAGAACAT
TACGGAGACC TGTTGACATT TGCCACAGGA CATAAATACT ATGGCATAAA TTTCGATGAG
GACGAGCGCG GCTGGTATTA CAGAGAATGG GCTCCTGAAG CCTATGAAGT ATACCTTACA
GGTGACTTCA ACGATTGGGA CAGACGTTCA CATCCGTTGA CACGCAATGA ATTTGGTGTG
TGGCAGATCT TCCTTCCATA CGATCTGTAT CAAAAACGTT TTGTTCATAA AAGTAAAATT
AAAGTACAGA TTGTAGGTGC CAATGGCACA CACGACCGTA TTCCGGCATA CATAACCCGC
GTTGTACAGG ATACTGAAAC AACAGACTTC TCCGGACAGC TTTGGTTCCC GCAAAAACCT
TTTGAATGGA CAGACCGCGA TTTCAATTTG CGCAAGATCA AAAATCCGAT TATCTACGAA
GCACACGTAG GGATGGCGCA GGAGAAAGAA GGTGTTGGTA CGTACAGAGA ATTTGCGGAT
AAGATTGTTC CCCGCATCCG TCAGATGGGC TATAACAGCA TTCAGCTGAT GGCTGTTATG
GAACACCCGT ATTATGGTTC ATTTGGTTAT CACGTTTCCA ATTTCTTTGC TCCTTCTTCC
CGCTTCGGCA CGCCTGAAGA TCTGAAATAC CTGGTAGATC GTGCACATAA ATTCGGACTG
GCAGTAATCA TGGACGTTGT GCATTCACAT GCCGTAAAAA ATCTGTCTGA AGGCCTGAAT
GAATTTGATG GCAGCGATCA TCAATACTTC CATCCGGGCG ACAGAGGGTA TCATACGGGC
TGGGATTCTA AACTATTTGA TTACGGCAAG CTTGAAGTAA AACGCTTTCT GCTATCAAAC
CTACGTTACT GGCTGGAAGA ATATCACTTT GATGGTTTCC GCTTTGATGG TGTTACTTCG
ATGCTGTATT TTGATCACGG CATGAAAACA TTTGACAGCT ACGACACCTA TTTTAAAGGC
GGTGTGGATT TTGATGCCGT TACGTATTTA CAATTAGCCA ACGAGGTAAC CCATAGGTAT
TTAAAAGATT CCATTACGAT TGCTGAAGAT GTAAGCGGTA TGCCGGGCTT ATCACGCTCC
ATACGAGATG GCGGTGTTGG TTTCGATTAC CGTTTGGCAA TGGGTATACC TGATTTCTGG
ATCAAGTATT TAAAACATTT GCAGGATGAG CAATGGAACA TCTATGAAAT GTGGAGCACG
TTAACGAATC GACGCTACAA AGAAAAAACA ATTGCCTATG CAGAGTCGCA TGACCAGGCA
ATGGTTGGCG ACAAAACCAT TGCCTTCTGG TTAATGGACA AGGAAATGTA TTTCCACATG
CAGGTAGATG ATCCCAATCC GGTGATTGAC CGCGGCATTG CGATACATAA GCTGCTGCGT
TTATTTACGT TTGCCCTGGG CGGCGAAGGG TATTTAAACT TTATGGGCAA TGAATTCGGG
CATCCGGAAT GGATTGATTT TCCAAGGGAA GGAAACGGCT GGAGTTACCA ATACGCCCGC
CGCCAGTGGT CGCTGGTAGA TAATCCTAAA TTGAAATATC AATACTTAGG AGCATTTGAT
GAAGCGATGA TGCGTCTGGT ACGTAAAACA CGATTGCTTG CAGCAGAACC TGCACAGCAA
TTGAATATGG ACGACCACAA CAAAGTGATT ATCTTCGAAC GCAATAATAT GATCTTTGTA
TTCAATTTCA GTGTAAGCAA TTCGGTATTT GATTATAAAT TCAAATCATT CGCACCGGGT
ACATTTGAGA TCGTATTAAA TAGCGACGAC ACACGTTTCG GCGGTCACGG CCGTGTAGAT
GACACACTTG AATACCATAC CAACACAGAA GGTCAGTTGA GCATCTATAC GCCAAACAGA
AGTGTGCTGG TTTTTCAACG GAAAGAAGCA TCAGAATAA
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| Protein sequence | MKEKKGIALI EDDPWLEPYE AEIQDRIIRY KRAVKEIKEH YGDLLTFATG HKYYGINFDE
DERGWYYREW APEAYEVYLT GDFNDWDRRS HPLTRNEFGV WQIFLPYDLY QKRFVHKSKI
KVQIVGANGT HDRIPAYITR VVQDTETTDF SGQLWFPQKP FEWTDRDFNL RKIKNPIIYE
AHVGMAQEKE GVGTYREFAD KIVPRIRQMG YNSIQLMAVM EHPYYGSFGY HVSNFFAPSS
RFGTPEDLKY LVDRAHKFGL AVIMDVVHSH AVKNLSEGLN EFDGSDHQYF HPGDRGYHTG
WDSKLFDYGK LEVKRFLLSN LRYWLEEYHF DGFRFDGVTS MLYFDHGMKT FDSYDTYFKG
GVDFDAVTYL QLANEVTHRY LKDSITIAED VSGMPGLSRS IRDGGVGFDY RLAMGIPDFW
IKYLKHLQDE QWNIYEMWST LTNRRYKEKT IAYAESHDQA MVGDKTIAFW LMDKEMYFHM
QVDDPNPVID RGIAIHKLLR LFTFALGGEG YLNFMGNEFG HPEWIDFPRE GNGWSYQYAR
RQWSLVDNPK LKYQYLGAFD EAMMRLVRKT RLLAAEPAQQ LNMDDHNKVI IFERNNMIFV
FNFSVSNSVF DYKFKSFAPG TFEIVLNSDD TRFGGHGRVD DTLEYHTNTE GQLSIYTPNR
SVLVFQRKEA SE
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