Gene CHU_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1340 
Symbol 
ID4185845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1564116 
End bp1564619 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content36% 
IMG OID638071334 
Producthypothetical protein 
Protein accessionYP_677952 
Protein GI110637745 
COG category[S] Function unknown 
COG ID[COG4276] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.326577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGCA TAGAACGAAA ACAACAATTT CCTGTAAGTG TGGAAGAATT ATGGAATTTT 
TTTTCGGTTC CATGTAATTT TGAAAAAATA ACACCACCTT CCTTGGGTTT CAATATCGTT
TCCGGAGGAA ATTGGCCTAT GTATGTCGGC ATGACAATAA CCTATACGGT TAGTTCCGTT
TTTAATCTTC CATTCACCTG GGTAAATGAA ATCACACAGG TAGAAGAACG GAAATCTTTT
GTAGATAAAC AGCGTTCGGG GCCTTATGCA TATTGGAATC ACGAACATTA TTTTAATACT
ATTCCAAATG GTGTTGAGAT GATCGATATT CTGGAATATA AAATGCCGTT GGGTTTGTTA
GGTAGTCTGG TACACCCTTT TTCACTAAAA GGGAAAATTG AAAAAATATT TCAATACAGA
AGCGGGAAAC TCGAAGAATT ATTTGGTGTA TATACAGCGC CGGGTGTTAT TCAGGATCTA
TTAAGTAAAA ATCATAGAGA TTGA
 
Protein sequence
MYRIERKQQF PVSVEELWNF FSVPCNFEKI TPPSLGFNIV SGGNWPMYVG MTITYTVSSV 
FNLPFTWVNE ITQVEERKSF VDKQRSGPYA YWNHEHYFNT IPNGVEMIDI LEYKMPLGLL
GSLVHPFSLK GKIEKIFQYR SGKLEELFGV YTAPGVIQDL LSKNHRD