| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1335 |
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| Symbol | |
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| ID | 4185840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1551018 |
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| End bp | 1557146 |
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| Gene Length | 6129 bp |
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| Protein Length | 2042 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638071329 |
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| Product | endoglucanase-like protein |
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| Protein accession | YP_677947 |
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| Protein GI | 110637740 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0110821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAA AGATCAGGAA CTTAATCATT ATCTGTGCAG GTTTATTCTT CCTTTCAACG
CATTTAAGTG CTCAGACACC TTATTTTACC CCAGCTGAAT ACAAAAAAGC GTTGTGGATG
ACTACCCGTT TTTATGGTGG TCAGCGTGCA GGCGACAATA ACTGGTTATT ATACAATCAC
CTTCCTTCCG GAGTTAATGC TTCATTAAGA GGAAAATCCT TTTTACAGGA TGGTGATGCA
GGTTATGATT TGAGTGGAGG TTGGTTTGAT TGTGGAGATC ATGTAAAATT TGGTCAGACG
GAATATTATT CTGCCTACAT GCTTTTGAAA GGTTATGCTG AATTCCCAAC CGGGTACGGT
GATTATTATG CCTATGACTA CCAAGGATAT AAAACAGCAA ACAGCTGGAA CTGGGAAGGA
ACAGGCCACT CGCCAAACGG CATACCAGAC ATTCTGGATG AAGTAAAACA TGCTACAGAT
TATTTTATTA AGTGTGCAAA AAACTCTACA ACCTTCTATT ATCAGGTCGG TCAGGGTGGG
CCCGATCACA TGCTTTGGGA AACAGCCGTA CAAATGCAGA CAGAATCTGT TGGGAATGGC
GGAGAACCAA GAGTTGTTTA TAAAAACCCC AGTGATGCTT CCATGCCTTC TTTCTGCGGA
GCAACATTAG CTTTAATGTC CAGATTATAT AGACAATACG ATGCAGCGTA CGCAGACTTA
TGCCTGGAGC ATGCAAAATA TGCCTATGAT TACGCGAAGG CACACCCAGG TACAATAGGT
TCTCCGGATG GTGGTTTTTA TCCTGCCAAC AGCAACTGGA GAGATGATTA CTCTTCTATG
TGTGCCGAAT TATTCTGGGC AACCAATACG GCTGCTTATA AAACAGAAGC ATTATCGTTT
ACAATAGCAG CATCCGGTTC TGCAAACATT ACTGGTAACA CGTATGGATT TGATTATTCA
AATAACGGAG ATATTGCCAT TTACAATCAG GCTTTATTAG GAAATACAAG TGCTAAAGGG
GTTTTAAACA CGATTGTAAC AAGTAATTAT TTAGGCAATG TACAGGGAGA CGGTCAGTTT
AACGGCGGTA ATACAACCTG GGGACCGACC CGATACAATG CAAACACTGC ATTCATCGTT
GCCTTATGGC AAAAATTATA TGGAACTGAT GCTACTCCCC ATAAATATAT TTATGACAAC
ATTGATTACT TACTTGGAAA AAACTCAAGT AACCAATCAT TTATTGTCGG CTTCGGAACA
AAATCTCCAA AATTCCCGCA CCATAGAAAT GTTTACCTGC GGGATAATAA TCCATCCGAT
GCTGTAAAAG CTACAATGAC CATTCCAGCA AAAAATCAAC AGTTTGGGTT AATGGTTGGC
GGCTCAAGAA ACGCATCTTC TTTCAGTGAC AATGTTGTAA ACTATCAGCA CACAGAAGGT
GGTATTGATT ACAATGCCTG TCTGGTAGGT GTACTCGCTT ACCTTAACTC TGTTTTAGCA
CCCGTATCTC AACACCCTTC TCCAAATTTA GGCGCAGACA AATCGTTGTG TGGTACCGGG
AGTATAGTAC TGAATTCGGG TATTGCAACG GATACTAAAA AAACATTTAC ATGGAAAAAA
GATAATGTAG TTGTACAGGC TGCTTCAACA ACAGCTAATA CATATACGGC AACAGCTGCA
GGTACCTATG TAGTAGTACT TGATTCTGCA GGCAAATGGT CTACACAGGA TGAAATAATA
ATTACAGCTA CATTACCTGC ATTCAGCCTT GGATCCGGAG TTCAGTTATG TAACCCGGCT
ACCGCAACAT TAGATATCGG TGCAACAGGC ACGGGTTATA CCTACCAATG GAAGAAAAAC
AATGTTGTGC TTGTTGGTGC AACCGCTAAA ACATTAGAAG TATCTTCTGC AGGCACCTAC
GTGGGAACAT TAAGTGCATC CGGCTGTACG TCTACAACCA GCAGTGTGAT TGTTACGTCT
TCTCTGCCCG TTGCCGGAAA TGACACACTT TGTGCAGCAG GTACAGCGGC ATTAACCATA
ACAGGCAGCG GCGGTCCTTA CCAATGGTAT ACAGCAGCTA CGGGAGGTAC ATTACTAACA
ACCGGAACCA GCTACAGTCC TTCTGTAACG GCGTCAACAA CCTATTATGT ACAGGATGGA
AGTTCTGTAA GCGTTACTGC CGGGCCTTCT TCCGCATCTA ATCCCTTATC AGGAGGAACA
AATGGCGGTA ACGTGGGTAT GAAATTCACC GCGTCAAAAG CATTCACTAT TACACAGCTG
AAAATATTAC CGTATGTATA TAGTTGCGGT TCGAGCGATA ATGTATTTGC GACATTTGAT
CTGTCAAAAG ATGGTACCAA AATCGGAACA TACACATCCT CTTCTGTTCC TTGCACAGGC
ACACAAAGTG GCTCTCCGTT CAATACATTT TATACGTTGA ATTTCCCGAC AGCAATTTCT
ATCCCGGGTG CAGGAAATTA TACCCTAACA CCAAATGGCG GTAACGCAAT TGTATGGTTT
GCTTCCGGTG CAAACTTCAG TACCATGGAT GCTGCCGGTG TAATGGACAT TACAGATGAT
ACACGTGATG ACATGGCAAA CTCCTTCCCG GGTATCTTCG ATATAAAAAT ACAATCCGGT
TCAGGTTGTG CAAGAACACC CGTATACGCG ATTGTAAATG CCGCCTTCCC GAATTGCAAA
GCCAGTAAAT CAGCACAGAC AATTACCTTC GGAGCCTTAC CAGCTAAAGT TTACGGAGAC
GCACCTTTCA CGTTGGCAGC TACCGCTTCT TCCGGCTTAG CCGTAACCTA TACAAGCAGC
AACCCTGCGG TAGCAACTGT TACTGCTGCC GGTGTGGTTA CAATCGTTGG TGCAGGCACT
ACCGTGATTA CAGCAAATCA GGCAGGTAAT ACAAACTACA ATGCTGCAAC TGCTGTACCG
CAAACATTAA CCGTTGGCAA AGCAAACCAG ACCATTACAT TCGCAACACT TCCGGCTAAA
ACAGTTGGTG ATGCAGACTT TACGTTAGCA GCAACAGCTT CTTCCGGCTT AGCCGTTACC
TATACAAGCA GCAACCCTGC GGTAGCAACT GTTACTACTG CCGGTGTGGT TACCATCGTT
GGTGCAGGTA CTACCGTAAT TACAGCAAAC CAGGCAGGTA ATGCAAACTA CAATGCTGCA
ACTGCTGTAC CGCAAACATT AACCGTTGGC AAAGCAAACC AGACCATTAC ATTCGCAACA
CTTCCGGCTA AAATAGTTGG TGATGCAGAC TTTACGTTGG CAGCTACCGC TTCTTCCGGC
TTAGCCGTAA CGTACACAAG CAGCAACCCT GCGGTAGCAA CGGTTACTGC TGCCGGTGTG
GTTACCATCG TTGGTGCAGG TACTACCGTA ATTACAGCAA ACCAGGCAGG TAATACAAAC
TACAATGCTG CAACTGCTGT ACCGCAAACA TTAACCGTTG GCAAAGCAAA CCAGACCATT
ACATTCGCAA CACTTCCGGC TAAAATAGTT GGTGATGCAG ACTTTACGTT GGCAGCTACC
GCTTCTTCCG GCTTAGCCGT AACGTACACA AGCAGCAACC CTGCGGTAGC AACGGTTACT
GCTGCCGGTG TGGTTACCAT CGTTGGTGCA GGTACTACCG TAATTACAGC AAACCAGGCA
GGAAATGCAA ACTACAATGC TGCAACTGCT GTACCGCAAA CATTAACCGT TGGCAAAGCA
AACCAGACCA TTACATTCGG AACACTTCCG GCTAAAACAG TTGGTGATGC CAGCTTCAGC
TTAACCGCAA CAGCTTCTTC CGGTTTAGCC GTAACGTATA CAAGCAGCAA CCCTGCGGTA
GCAACGGTTA CTGCTGCCGG TGTGGTTACC ATCGTTGATG CAGGTACTAC CGTGATTACA
GCAAACCAGA CAGGTAATGC AAACTACAAC GCTGCTCCTG CTGTTACGCA GACATTAACG
GTAAATACAC CTGCTAAAAC AAACCAGACA ATTACATTCG GAACAATTCC GGCTAAAACA
GTTGGTGATG CCAGCTTCAG CTTAACCGCA ACGGCTTCTT CCGGTTTAGC CGTAACCTAT
ACAAGCAGCA ACCCGGCCGT AGCAACGGTT ACTGCTGCCG GTGTGGTTAC AATCGTTGGT
GCAGGCACTA CCGTGATTAC AGCAAATCAG GCAGGTAATA CAAACTACAA TGCTGCAACT
GCTGTACCGC AAACATTAAC CGTTGGCAAA GCAAACCAGA CCATTACATT CGCAACACTT
CCGGCTAAAA CAGTTGGTGA TGCAGACTTT ACGTTAGCAG CAACAGCTTC TTCCGGCTTA
GCCGTTACCT ATACAAGCAG CAACCCTGCG GTAGCAACTG TTACTACTGC CGGTGTGGTT
ACCATCGTTG GTGCAGGTAC TACCGTAATT ACAGCAAACC AGGCAGGTAA TGCAAACTAC
AATGCTGCAA CTGCTGTACC GCAAACATTA ACCGTTGGCA AAGCAAACCA GACCATTACA
TTCGCAACAC TTCCGGCTAA AATAGTTGGT GATGCAGACT TTACGTTGGC AGCTACCGCT
TCTTCCGGCT TAGCCGTAAC GTACACAAGC AGCAACCCTG CGGTAGCAAC GGTTACTGCT
GCCGGTGTGG TTACCATCGT TGGTGCAGGT ACTACCGTGA TTACAGCAAA CCAGGCTGGA
AACGCTACTT ACAACGCCGC TCCTGCTGTT ACGCAGACAT TAACCGTTGG CAAAGCAAAC
CAGACAATTA CCTTCGGAAC AATTCCGGCT AAAACGGTTG GTGATGCCAG CTTTACCTTA
ACCGCAACGG CTTCTTCAGG TTTAGCCGTA ACGTACACAA GCAGCAACCC TGCGGTAGCA
ACCGTTACTG CTGCCGGTGT GGTTACTATT GTTGGTGCAG GCACTACGGT TATTACAGCC
AACCAGGCTG GAAACGCTAC TTACAACGCC GCTCCTGCTG TTACGCAGAC ATTAACGGTA
AATACACCTG CTAAAACAAA CCAGACAATT ACCTTCGGAA CTCTTCCGGC TAAAACGGTT
GGTGATGCAA GCTTTACCTT AACCGCAACG GCTTCTTCCG GTTTAGCCGT AACGTACACA
AGCAGCAACC CTGCGGTAGC AACCGTTACT GCTGCCGGTG TGGTTACTAT TGTTGGTGCA
GGCACTACGG TTATTACAGC CAACCAGGCT GGAAACGCTA CTTACAACGC CACTCCTGCT
GTTACGCAGA CATTAACGGT AAATACACCT GCTAAAACAA ACCAGACAAT TACATTCGGA
ACAATTCCGG CTAAAACAGT TGGTGATGCC AGCTTCAGCT TAACCGCAAC GGCTTCTTCC
GGTTTAGCCG TAACGTACAC AAGCAGCAAC CCTGCCGTAG CAACGGTTAC TTCCGCTGGT
GTGGTTACTA TCGTTGGTGC AGGTACTGCC GTAATTACAG CAAACCAGGC TGGAAACACT
ACTTACAACG CCGCTCCTGC TGTTACACAG ACATTAACCG TGAATGCGCC GGCACCAGTA
TCTGTTATTC AGGTTTTAAC CAGTACATCT GCCATCGTTG AGAATGACGG AGCAACGATC
AATATCGGTT CTAATTTGAT GAACACTTCT ACTTCATTGT ATACATTCAC TATAAAAAAT
ACAGGATCCA GCAATTTAAT TATTGACAAC ATTGTTGGCT CAACAGGATT CAGCGCGAAT
CAGATCTCTC CTTCAGGTCC TATTCTTCCG AATTCATCTG CAACGTTTAC TATTTCAGGT
ATACCAAATA ATGTTGGCAG CCCAAGACAG GGAACAGCTA CGATATTCTA CAACAGTAAA
ATATTTACAA TTAATGTATC GGTAAGTGTG GGAACTCCTA CCGGTGTTGC AACGATGCTG
TCTCAATCTG ATATTGAAAT CTATCCGAAT CCTACCAGCG GTAATTCTAA CTTAGAATTC
AAAGGTACTT TTGACAATAT AGAAGTAACT ATATACAGTA TCGACGGAAG TAAAATTTCA
GTTTCTCAGC TTGGCTCCGC GAGTAGTTCG GTAGGTACGG TTGAAGTACA GGAATTACCT
TCTGGTGTTT ACCTGGTTGA AGTAAACACC ACACAGGGAA AATTGATAAA ACGCCTTATA
AAAGAATAG
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| Protein sequence | MNQKIRNLII ICAGLFFLST HLSAQTPYFT PAEYKKALWM TTRFYGGQRA GDNNWLLYNH
LPSGVNASLR GKSFLQDGDA GYDLSGGWFD CGDHVKFGQT EYYSAYMLLK GYAEFPTGYG
DYYAYDYQGY KTANSWNWEG TGHSPNGIPD ILDEVKHATD YFIKCAKNST TFYYQVGQGG
PDHMLWETAV QMQTESVGNG GEPRVVYKNP SDASMPSFCG ATLALMSRLY RQYDAAYADL
CLEHAKYAYD YAKAHPGTIG SPDGGFYPAN SNWRDDYSSM CAELFWATNT AAYKTEALSF
TIAASGSANI TGNTYGFDYS NNGDIAIYNQ ALLGNTSAKG VLNTIVTSNY LGNVQGDGQF
NGGNTTWGPT RYNANTAFIV ALWQKLYGTD ATPHKYIYDN IDYLLGKNSS NQSFIVGFGT
KSPKFPHHRN VYLRDNNPSD AVKATMTIPA KNQQFGLMVG GSRNASSFSD NVVNYQHTEG
GIDYNACLVG VLAYLNSVLA PVSQHPSPNL GADKSLCGTG SIVLNSGIAT DTKKTFTWKK
DNVVVQAAST TANTYTATAA GTYVVVLDSA GKWSTQDEII ITATLPAFSL GSGVQLCNPA
TATLDIGATG TGYTYQWKKN NVVLVGATAK TLEVSSAGTY VGTLSASGCT STTSSVIVTS
SLPVAGNDTL CAAGTAALTI TGSGGPYQWY TAATGGTLLT TGTSYSPSVT ASTTYYVQDG
SSVSVTAGPS SASNPLSGGT NGGNVGMKFT ASKAFTITQL KILPYVYSCG SSDNVFATFD
LSKDGTKIGT YTSSSVPCTG TQSGSPFNTF YTLNFPTAIS IPGAGNYTLT PNGGNAIVWF
ASGANFSTMD AAGVMDITDD TRDDMANSFP GIFDIKIQSG SGCARTPVYA IVNAAFPNCK
ASKSAQTITF GALPAKVYGD APFTLAATAS SGLAVTYTSS NPAVATVTAA GVVTIVGAGT
TVITANQAGN TNYNAATAVP QTLTVGKANQ TITFATLPAK TVGDADFTLA ATASSGLAVT
YTSSNPAVAT VTTAGVVTIV GAGTTVITAN QAGNANYNAA TAVPQTLTVG KANQTITFAT
LPAKIVGDAD FTLAATASSG LAVTYTSSNP AVATVTAAGV VTIVGAGTTV ITANQAGNTN
YNAATAVPQT LTVGKANQTI TFATLPAKIV GDADFTLAAT ASSGLAVTYT SSNPAVATVT
AAGVVTIVGA GTTVITANQA GNANYNAATA VPQTLTVGKA NQTITFGTLP AKTVGDASFS
LTATASSGLA VTYTSSNPAV ATVTAAGVVT IVDAGTTVIT ANQTGNANYN AAPAVTQTLT
VNTPAKTNQT ITFGTIPAKT VGDASFSLTA TASSGLAVTY TSSNPAVATV TAAGVVTIVG
AGTTVITANQ AGNTNYNAAT AVPQTLTVGK ANQTITFATL PAKTVGDADF TLAATASSGL
AVTYTSSNPA VATVTTAGVV TIVGAGTTVI TANQAGNANY NAATAVPQTL TVGKANQTIT
FATLPAKIVG DADFTLAATA SSGLAVTYTS SNPAVATVTA AGVVTIVGAG TTVITANQAG
NATYNAAPAV TQTLTVGKAN QTITFGTIPA KTVGDASFTL TATASSGLAV TYTSSNPAVA
TVTAAGVVTI VGAGTTVITA NQAGNATYNA APAVTQTLTV NTPAKTNQTI TFGTLPAKTV
GDASFTLTAT ASSGLAVTYT SSNPAVATVT AAGVVTIVGA GTTVITANQA GNATYNATPA
VTQTLTVNTP AKTNQTITFG TIPAKTVGDA SFSLTATASS GLAVTYTSSN PAVATVTSAG
VVTIVGAGTA VITANQAGNT TYNAAPAVTQ TLTVNAPAPV SVIQVLTSTS AIVENDGATI
NIGSNLMNTS TSLYTFTIKN TGSSNLIIDN IVGSTGFSAN QISPSGPILP NSSATFTISG
IPNNVGSPRQ GTATIFYNSK IFTINVSVSV GTPTGVATML SQSDIEIYPN PTSGNSNLEF
KGTFDNIEVT IYSIDGSKIS VSQLGSASSS VGTVEVQELP SGVYLVEVNT TQGKLIKRLI
KE
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