Gene CHU_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1328 
Symbol 
ID4185833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1542459 
End bp1544099 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content34% 
IMG OID638071322 
Producthypothetical protein 
Protein accessionYP_677940 
Protein GI110637733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.569709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.167039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA CCTTAAAATT TTTTCTGTAT CTGATTTTGT TATGCGTTTT CGGTATGCTT 
CTGTTTTCTT TTATCTCTGG ATACGAAGGA TGTATGCATT ATCTGATTAA TGCGATTGGA
GAAGCTGCAC GTGCTGACAA AATCATGGAG CTGGTAGCAC CGGATAAATT TTTAATTCTG
CAAAGTATTG GGATCTTCTG TATAGTAGTA CTTGCATCTA TTCTGGTTCT CTTTGAAAAA
ATATGGAGCC AGGCTGCAGC AGTTTTTATC TATTTTAAAA GACAGATTCA GCTACTTGTG
ACAGATCTTT TATACACAGA AGTTAAATGG GTATTAGTTA TACCATTAAT CAGTTCTGTT
TTTTTTGCGG TATCAATGCC CGTGTCTTAT GATGAAGCCT GGACTTACCT GCAATTTACC
GCGAAGTCTC CATTGGCATC CTTATGTTAT TATCCGGCTC CGAATAATCA CGTATTACAT
TCATTGATCA CAAACGTTAC CCGATACATA CCATTTTTCA ATCCCTTATT ATGTCTCAGA
ATTTCAAGCA TTGCCGTTTC ATTTTTCTGC TGGTTGATTT GTTTCTCTTT TATTAAAAAA
TATTATTCTA AAAACAGTTC GTTACTTATA GTAGGTATAG CTTCTATGCT TTTTATGTCT
GTATATTACA GTTACATGTC CAGAGGGTAT GGTCTGGTGC TGTTATTCTT TATCGTATCA
CTATATGCAG CATACAATAT TATTTTTAAT GCAGACCAGA CAAGACATTG GTTGATTTTT
AGTATAAGTA ATGTGCTGGG GTTTTTTACC ATGCCGTCTT TTTTATATGT GTTTATTATT
CTGAACCTGG TTATTTTATT GAATAATGGG TTACGAATCA AAAAACAGTT TTTCAGTAAT
GCAGCAGTTT TAGCTGTTGT GTTTGTGTTG TATTTGCCTA TAATCATCAT CAATGGCATT
GGAGCGCTTA CCAATAATCA GTTTGTAAAA CCAATTGCCA GAACGGAAGT ACTCGAAAAG
CTTCCGGATT TTTTCAGCCG GATGATCTCA GAAATTACTG GTGTACACTA TCTGGTTATT
CTTTTGTTTA TCCTGATATC CATACTGATG CTTATTAAAA ACAAAATGAA ATTCGAGTTG
ATTTTACTCG TTGTTTTTCT TTTGGCACCT GCAATTTTGT TGATCGGCCA TGCGGTCATT
CCTTTTCCAA GAACGTTTAA TTATTACGCC TTCGTTTTCG TATTTGCTAT GGTTATTCCT
TTTGGGAGCG TATTGGGAAA AAAATCTGTT GGGTACATAT TGCTGATAAC GCTATGTATT
CAAAGTGCCT GCTTTTTTAA TTTTTACTAT TCGATTGAAA AATATGAAGG CTTTAATATA
TCGTATCACG AAATAAATAA AAAGATAACC GGCCGGGGAA GCTATTTTTT TACAACCGTT
CTATTTGAAA CGAATTTTTT ATTTGAGAAT AAAACGCAGG GGTACGAAGC CGAAAAACTG
GAATTTCACT TCCCTCAAAT TAATGTGGAT GCAGATACCT TGAAAGGATT TGATTATTAC
ATTGTAGATA AGCAATACGA TTTTACTAAA ATAAAGAAAC CTGCTTATTC TGACAGCCGC
ACAAACGTAT ACGTAAAGTA G
 
Protein sequence
MKFTLKFFLY LILLCVFGML LFSFISGYEG CMHYLINAIG EAARADKIME LVAPDKFLIL 
QSIGIFCIVV LASILVLFEK IWSQAAAVFI YFKRQIQLLV TDLLYTEVKW VLVIPLISSV
FFAVSMPVSY DEAWTYLQFT AKSPLASLCY YPAPNNHVLH SLITNVTRYI PFFNPLLCLR
ISSIAVSFFC WLICFSFIKK YYSKNSSLLI VGIASMLFMS VYYSYMSRGY GLVLLFFIVS
LYAAYNIIFN ADQTRHWLIF SISNVLGFFT MPSFLYVFII LNLVILLNNG LRIKKQFFSN
AAVLAVVFVL YLPIIIINGI GALTNNQFVK PIARTEVLEK LPDFFSRMIS EITGVHYLVI
LLFILISILM LIKNKMKFEL ILLVVFLLAP AILLIGHAVI PFPRTFNYYA FVFVFAMVIP
FGSVLGKKSV GYILLITLCI QSACFFNFYY SIEKYEGFNI SYHEINKKIT GRGSYFFTTV
LFETNFLFEN KTQGYEAEKL EFHFPQINVD ADTLKGFDYY IVDKQYDFTK IKKPAYSDSR
TNVYVK