Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1328 |
Symbol | |
ID | 4185833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1542459 |
End bp | 1544099 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638071322 |
Product | hypothetical protein |
Protein accession | YP_677940 |
Protein GI | 110637733 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.569709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.167039 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTA CCTTAAAATT TTTTCTGTAT CTGATTTTGT TATGCGTTTT CGGTATGCTT CTGTTTTCTT TTATCTCTGG ATACGAAGGA TGTATGCATT ATCTGATTAA TGCGATTGGA GAAGCTGCAC GTGCTGACAA AATCATGGAG CTGGTAGCAC CGGATAAATT TTTAATTCTG CAAAGTATTG GGATCTTCTG TATAGTAGTA CTTGCATCTA TTCTGGTTCT CTTTGAAAAA ATATGGAGCC AGGCTGCAGC AGTTTTTATC TATTTTAAAA GACAGATTCA GCTACTTGTG ACAGATCTTT TATACACAGA AGTTAAATGG GTATTAGTTA TACCATTAAT CAGTTCTGTT TTTTTTGCGG TATCAATGCC CGTGTCTTAT GATGAAGCCT GGACTTACCT GCAATTTACC GCGAAGTCTC CATTGGCATC CTTATGTTAT TATCCGGCTC CGAATAATCA CGTATTACAT TCATTGATCA CAAACGTTAC CCGATACATA CCATTTTTCA ATCCCTTATT ATGTCTCAGA ATTTCAAGCA TTGCCGTTTC ATTTTTCTGC TGGTTGATTT GTTTCTCTTT TATTAAAAAA TATTATTCTA AAAACAGTTC GTTACTTATA GTAGGTATAG CTTCTATGCT TTTTATGTCT GTATATTACA GTTACATGTC CAGAGGGTAT GGTCTGGTGC TGTTATTCTT TATCGTATCA CTATATGCAG CATACAATAT TATTTTTAAT GCAGACCAGA CAAGACATTG GTTGATTTTT AGTATAAGTA ATGTGCTGGG GTTTTTTACC ATGCCGTCTT TTTTATATGT GTTTATTATT CTGAACCTGG TTATTTTATT GAATAATGGG TTACGAATCA AAAAACAGTT TTTCAGTAAT GCAGCAGTTT TAGCTGTTGT GTTTGTGTTG TATTTGCCTA TAATCATCAT CAATGGCATT GGAGCGCTTA CCAATAATCA GTTTGTAAAA CCAATTGCCA GAACGGAAGT ACTCGAAAAG CTTCCGGATT TTTTCAGCCG GATGATCTCA GAAATTACTG GTGTACACTA TCTGGTTATT CTTTTGTTTA TCCTGATATC CATACTGATG CTTATTAAAA ACAAAATGAA ATTCGAGTTG ATTTTACTCG TTGTTTTTCT TTTGGCACCT GCAATTTTGT TGATCGGCCA TGCGGTCATT CCTTTTCCAA GAACGTTTAA TTATTACGCC TTCGTTTTCG TATTTGCTAT GGTTATTCCT TTTGGGAGCG TATTGGGAAA AAAATCTGTT GGGTACATAT TGCTGATAAC GCTATGTATT CAAAGTGCCT GCTTTTTTAA TTTTTACTAT TCGATTGAAA AATATGAAGG CTTTAATATA TCGTATCACG AAATAAATAA AAAGATAACC GGCCGGGGAA GCTATTTTTT TACAACCGTT CTATTTGAAA CGAATTTTTT ATTTGAGAAT AAAACGCAGG GGTACGAAGC CGAAAAACTG GAATTTCACT TCCCTCAAAT TAATGTGGAT GCAGATACCT TGAAAGGATT TGATTATTAC ATTGTAGATA AGCAATACGA TTTTACTAAA ATAAAGAAAC CTGCTTATTC TGACAGCCGC ACAAACGTAT ACGTAAAGTA G
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Protein sequence | MKFTLKFFLY LILLCVFGML LFSFISGYEG CMHYLINAIG EAARADKIME LVAPDKFLIL QSIGIFCIVV LASILVLFEK IWSQAAAVFI YFKRQIQLLV TDLLYTEVKW VLVIPLISSV FFAVSMPVSY DEAWTYLQFT AKSPLASLCY YPAPNNHVLH SLITNVTRYI PFFNPLLCLR ISSIAVSFFC WLICFSFIKK YYSKNSSLLI VGIASMLFMS VYYSYMSRGY GLVLLFFIVS LYAAYNIIFN ADQTRHWLIF SISNVLGFFT MPSFLYVFII LNLVILLNNG LRIKKQFFSN AAVLAVVFVL YLPIIIINGI GALTNNQFVK PIARTEVLEK LPDFFSRMIS EITGVHYLVI LLFILISILM LIKNKMKFEL ILLVVFLLAP AILLIGHAVI PFPRTFNYYA FVFVFAMVIP FGSVLGKKSV GYILLITLCI QSACFFNFYY SIEKYEGFNI SYHEINKKIT GRGSYFFTTV LFETNFLFEN KTQGYEAEKL EFHFPQINVD ADTLKGFDYY IVDKQYDFTK IKKPAYSDSR TNVYVK
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