Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1321 |
Symbol | norV |
ID | 4186131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1537121 |
End bp | 1538593 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638071315 |
Product | rubredoxin |
Protein accession | YP_677933 |
Protein GI | 110637726 |
COG category | [C] Energy production and conversion |
COG ID | [COG1773] Rubredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.920008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0714632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAAC GTATATCTGT TGAAGTATAT TGTAAGGGCG GGATTATCTC GCCCGGAACG CTGCGTAAAA TTGCTATGAT TGCACAGCAG TTTGGAGCGG AATGTTTGCA ATTAGGCACA CGCCAGGAAA TCCGGTTTAC CATAAAAGAA ATTTTTATGG CAGATTTTAA AATACGGTTT GATTTATTAT CGCTTTCCTA TTCCATCGGT ATTCATGCAC ATTTTAATAT TGTATCTTCC TGTCTGGTAA AAGATATTTT ACAAACAAAG GTGTGGCTCA CCGAAGGAGA ATACAAGGAC ATATTGGAGA GCTTTGATTT TCAGCCACGA ATCGCAATTA ATATTACGGA TCCGGATCAG TATGCTATGC CCTTATTTAC CGGTGTGCTG AATTTTATTG CCTCGACGGT AGAAGGCTAT TGGAATGTAT ATTTTTCGCT TCCGGAACAA AAGGAGCAGG GCTGGCTGCC TGTGTTGATT CAATCTGAAA AAATATCCAG TTTCAGCATG TTTGTACAAA CGTGCATATT CGCACAGGAT AAAATTTCGT TAAATGAATT AATGGAAGAA CTGTATCTGC TGGATACCTG GAATTTTAAA AAGGTTGATG CGTATCCTGC CATTCCGGAT TATCACTTCT TTCCGGTAGA GGGCTTTCAT CCATACGGAA GCAAACACTG GCTGGGTATA TTCAATACAC ATAATGAATT TTCAATCAGC CTGATTGATG CTATTTGTGT GGAAGCCCTG GAATCAAATA TTGGCACCAT TTATATCAGT TCATGGGATA GTTTTCTACT GAAAAATATT TCAACTGTCC GTATTCCTTT CTGGGAGCAG CTATTGGGTC TGTATGATGT AAGCACTGGC CATGCAGCAC ATGAACTGAA CTGGAACATG AACGAATGGA ATATGAACAG CAATGAAGTC CGTTCGTATG TGAATGATTA TTTCAGGGTA CGTGATAAGC GTACAGAGGG CTTGATTCTG GGTGTAAATA ATCATCCGAA TGATACGTTT TATTCTATAA AAGTTGTTGA AGAACCCTTG TTTACATTTC TTGGGAAGAA TTGTTTTCCT GTATACCATA TCCGCTATAA AGAAAATTTT AATCCGAATA ATCCGGTAGA CGTGGCCTTT ATGGATTATG TTCAAAAAAA GAATTTACCC GAGTTTATCA GTTATTTAAC GGAGGAATAT TATACAGCAA AAAAAGCAAG ATTTGACAAA GCATTAGTAA CGCCGGCACC GGCACCGGTA ATCGTTCAGA AATCCAAAGA AGCATTTGAG TTTTCGTATC AATGCAGTGT GTGCTTAACC ATCTATGATC CTGCATATGG GGATGCTGAT GAAGGTATTG TACCCGGTAC TTCTTTTGAT GCATTACCAC AAAATTATTG CTGTTCCATC TGTTCAAATT CAAAAAAAGG ATTTAACTTG TTTATCGATA CAGAAACCAA ACATGCCAGC TAA
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Protein sequence | MPKRISVEVY CKGGIISPGT LRKIAMIAQQ FGAECLQLGT RQEIRFTIKE IFMADFKIRF DLLSLSYSIG IHAHFNIVSS CLVKDILQTK VWLTEGEYKD ILESFDFQPR IAINITDPDQ YAMPLFTGVL NFIASTVEGY WNVYFSLPEQ KEQGWLPVLI QSEKISSFSM FVQTCIFAQD KISLNELMEE LYLLDTWNFK KVDAYPAIPD YHFFPVEGFH PYGSKHWLGI FNTHNEFSIS LIDAICVEAL ESNIGTIYIS SWDSFLLKNI STVRIPFWEQ LLGLYDVSTG HAAHELNWNM NEWNMNSNEV RSYVNDYFRV RDKRTEGLIL GVNNHPNDTF YSIKVVEEPL FTFLGKNCFP VYHIRYKENF NPNNPVDVAF MDYVQKKNLP EFISYLTEEY YTAKKARFDK ALVTPAPAPV IVQKSKEAFE FSYQCSVCLT IYDPAYGDAD EGIVPGTSFD ALPQNYCCSI CSNSKKGFNL FIDTETKHAS
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