| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1319 |
|---|
| Symbol | |
|---|
| ID | 4186129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1532236 |
|---|
| End bp | 1533552 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638071313 |
|---|
| Product | nitrate/nitrite transporter |
|---|
| Protein accession | YP_677931 |
|---|
| Protein GI | 110637724 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0292911 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAC ATAAGGCTAC AACAATTAAT CTGTTCAGTT TAAAGACACC TAACATGAAA
GCATTCCACA TGACCTGGAT GGCCTTCTTT CTGTGTTTTT TCGGATGGTT TGGTATTGCT
CCGTTAATGG TTATGGTTCG CGATGAATTA CATTTAACGA AAGGAGAAAT CGGAAACATC
ATGATCGCAT CTGTTTCCAT AACCATCTTT GCCCGTATTC TGATTGGCTA TTTATGTGAT
CGTGTAGGAC CACGGATCAT GTATGCAGCG TTATTGATCC TGGGTGCATT TCCCGTAATG
CTGATCGGAC TTAGTAACGA TTATACGTCG TTTCTATTGT TTCGCTTAAC CATTGGTGTG
ATCGGTGCAT CTTTTGTGGT TACGCAGTTT CATACTTCGG CTATGTTTGC ACCTAATATT
ATAGGAACAG CAAATGCCGT TACAGCAGGC TGGGGCAATC TGGGCGGAGG AGTTACGCAG
CTTGTAATGC CTTTGATCTT TGCAGGCTTT GTAGGATTGG GTTATTCAAA CAGCGAATCA
TGGAGGCTGG CAATGGTGGT GCCGGGTATC GCCTTATTGA TTATGGGTAT CTTATATTTT
TTATATACAA CAGATACACC GGAAGGTAAT CTCGCGGACC TGAAGAAGAA GGATCCGAAT
TTTACGCTAA AGAAAAAGCA GTCGCAGGTA TCATTTGCTG AAATTTTTAA AGATTACAGG
GTTTGGGTAC TGGCGTTTTG TTACGGCGCC TGTTTTGGTA TTGAAATTAC AATTGATAAT
ATCGCTGCTT TATATTTTAA AGATAAATTT AATTTGTCGC TTGAAGCTGC AGGGCTGATC
GCTGCTTCGT TTGGGATGAT GAACCTGTTT GCGCGTGCAC TTGGCGGTAT GTTAAGTGAT
AAAATAGGAA ATACAAAAGG ATTGAATGGC CGTGTATTGG TATTGGGTGC CTGTATTTTA
TTAGAAGGTA TCGGTATTCT TATTTTCTCA AACATGGAAG TACTTGTGTT TTCCGTGATC
TCCATGATCG GTTTTGCTTT GTTTGTAAAA ATGTCTAACG GCGCCACCTA TGCAGTTGTT
CCTTTTGTGA ATAAAAATGC GGTAGGCAGT GTTGCCGGTA TTGTTGGTGC AGGCGGTAAC
ATTGGTGCCG TGTTGATGGG CTTTTTATTT AAAAGCGAAT CGCTTACGTA TAACGATGCC
TTTTCAATTA TTGGTTATTG TGTATTAGGT ATAGCTGTAC TGGCTTTCAC GATCCGTTTT
GTAACAAGCA CAGAAAAAAA ACAGGTTGAG TTTACAGCTG TTGAAAGTTT AGCATAA
|
|---|
| Protein sequence | MNTHKATTIN LFSLKTPNMK AFHMTWMAFF LCFFGWFGIA PLMVMVRDEL HLTKGEIGNI
MIASVSITIF ARILIGYLCD RVGPRIMYAA LLILGAFPVM LIGLSNDYTS FLLFRLTIGV
IGASFVVTQF HTSAMFAPNI IGTANAVTAG WGNLGGGVTQ LVMPLIFAGF VGLGYSNSES
WRLAMVVPGI ALLIMGILYF LYTTDTPEGN LADLKKKDPN FTLKKKQSQV SFAEIFKDYR
VWVLAFCYGA CFGIEITIDN IAALYFKDKF NLSLEAAGLI AASFGMMNLF ARALGGMLSD
KIGNTKGLNG RVLVLGACIL LEGIGILIFS NMEVLVFSVI SMIGFALFVK MSNGATYAVV
PFVNKNAVGS VAGIVGAGGN IGAVLMGFLF KSESLTYNDA FSIIGYCVLG IAVLAFTIRF
VTSTEKKQVE FTAVESLA
|
|---|
| |