| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1312 |
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| Symbol | dapA |
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| ID | 4186122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1523323 |
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| End bp | 1524216 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638071306 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_677924 |
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| Protein GI | 110637717 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.344915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCACACGT TTTACGGTAC AGGAACAGCT CTTATTACTC CGTTTAAAAA AGACCATTCG
GTAGATTACG ACGCGTTCAA AAACTTAATT GAATTTAACA TCTCTTCGGG TGTTGATTAT
ATAGTTGTAA ATGGTACTAC AGCTGAATCT GCAACTACTT CAAAAGAAGA AAAAGCAAAG
CTGCTTGAAG TTGCTCTGGA CGTAAATAAT GGTCGTGTGC CTGTAATGTA TGGCATTGGC
GGCAATGACA CGGCTGAAGT GATTCAACGC ATCGGTTCGG CTGATTTTAA AGGCGTAGAT
GCATTACTTT CTGTTTGCCC GTACTACAAC AAACCTTCTC AGGAAGGCGT TTTTCAGCAT
TACAAAGCCA TTGCCGAAAA ATGTCCGGTT CCGGTGTTAG CATACAACGT TCCGGGAAGA
ACCGGTATTA ATATATCTGC TAAAACGTCT ATCCGTTTAA GTGAGGTTAA AAACATATTT
GGCATTAAAG AAGCAAGCGG CGATTTAGTT CAGGCACTTG AAATCATTAA AAATACGCCA
AATGAGTTTT TGGTTATTTC AGGCGACGAT CTGTTAGCCG TACCAACCAT TTCTCTAGGT
GCTGTAGGAG CTATTTCGGT TCTTTCCAAT ACGTACCCTG CTAAATTTTC AGAAATGATT
AAAGCAGCCA TACAGTCCCG TTTTCAGCAG GCAACGCAAA TCCTTGCCCG ATTCACGGAG
ATGAACCCGT TGATGTACGA AGAAGGCAAT CCGGTGGGCG TTAAAAGCTT ATTGGAACTT
ATGGGTATCT GTTCGAGCGA AGTACGTTTA CCCTTGGTAA AAGCATCCGG TGAATTAATT
CATAAAATTG AACAGGCGCA CGTAAAAATT ACACGCGAAT ACGCAAATCA TTAA
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| Protein sequence | MHTFYGTGTA LITPFKKDHS VDYDAFKNLI EFNISSGVDY IVVNGTTAES ATTSKEEKAK
LLEVALDVNN GRVPVMYGIG GNDTAEVIQR IGSADFKGVD ALLSVCPYYN KPSQEGVFQH
YKAIAEKCPV PVLAYNVPGR TGINISAKTS IRLSEVKNIF GIKEASGDLV QALEIIKNTP
NEFLVISGDD LLAVPTISLG AVGAISVLSN TYPAKFSEMI KAAIQSRFQQ ATQILARFTE
MNPLMYEEGN PVGVKSLLEL MGICSSEVRL PLVKASGELI HKIEQAHVKI TREYANH
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