Gene CHU_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1294 
Symbol 
ID4184857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1507692 
End bp1508267 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content31% 
IMG OID638071288 
Producthypothetical protein 
Protein accessionYP_677906 
Protein GI110637699 
COG category[S] Function unknown 
COG ID[COG3059] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0133647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.499874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAT TAATTGAATT TTTAGCGAAT AGCCAATCGT ATTTTATTAA TTTGGCGAGA 
ATATCGATTC TTGTAGTTAT GGTTTGGATT GGCGGACTAA AAGCCTATCA GTATGAAGCA
GATGGGATTG TCCCATTTGT TGCCAATAGT CCATTAATGT CTTTTCTTTA TAATAAAAAA
ACTCCTGAAT ACAATGATTA TAAAAATCCA GAAGGAAAAA CAGTTCAAAA AAATATAGAT
TGGCATAAAG AAAATGGAAC ATATATTTTT GCATATGGAT TAGGAACTGT TATAATAATT
ATAGGCTTAT TAACTTTTAT TGGAATCTGG CATAATAAAA TTGGATTATT AGGCGGAGTA
CTAACCTTTG GTATGTCATT AGTTACATTA ACTTTTTTGA TTACAACACC AGAAGTATAT
GTTCCAAATC TTGGCGGAGA TTTTCCAACA CCACAATATG GATTTCCATA TTTATCAGGC
GCAGGCAGAT TGGTAATAAA AGACGTAATA ATGATGGCTA CCGGACTAAT TTGTGCATCA
GATTGTGCAC GGAAACTTTT AGCACAAAAG AAATAA
 
Protein sequence
MNKLIEFLAN SQSYFINLAR ISILVVMVWI GGLKAYQYEA DGIVPFVANS PLMSFLYNKK 
TPEYNDYKNP EGKTVQKNID WHKENGTYIF AYGLGTVIII IGLLTFIGIW HNKIGLLGGV
LTFGMSLVTL TFLITTPEVY VPNLGGDFPT PQYGFPYLSG AGRLVIKDVI MMATGLICAS
DCARKLLAQK K