Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1293 |
Symbol | |
ID | 4184856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1507230 |
End bp | 1507619 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 638071287 |
Product | hypothetical protein |
Protein accession | YP_677905 |
Protein GI | 110637698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000617258 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.474453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAT TGGATTACAT CTTTTACAAA GTCAGCAAAT ATTATCAAGG AGATGCCAAT CCTGATTTTT ACCCCATTTA TATCTTAACT CTTATTTCTT TATCTTCAAT AAGTATTATT TTAAATACAA CTGAGCTTTT AATTGGTGAA AAGTTAGTCG ATTTGAAAAA TAATGATGTG TTGGCAATAT CAATAGGTAT TTTTATATGT GGATTTTTCA GTGTATTATT TTATTTAGTA TATATTAAAT TCGGTAGAAA TTATAGAATA TCTTTTAATG AATCTAGAGT TGGCAGAATA TTAGGTTCGA TAGGTGTAAT TACATTGATT GTTGTTTTGT TTCTTTCAGC ATTATTATTG TATTCAATTA GATTCAGATC TTTTGCTTAA
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Protein sequence | MKLLDYIFYK VSKYYQGDAN PDFYPIYILT LISLSSISII LNTTELLIGE KLVDLKNNDV LAISIGIFIC GFFSVLFYLV YIKFGRNYRI SFNESRVGRI LGSIGVITLI VVLFLSALLL YSIRFRSFA
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