Gene CHU_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1293 
Symbol 
ID4184856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1507230 
End bp1507619 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content25% 
IMG OID638071287 
Producthypothetical protein 
Protein accessionYP_677905 
Protein GI110637698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000617258 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.474453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT TGGATTACAT CTTTTACAAA GTCAGCAAAT ATTATCAAGG AGATGCCAAT 
CCTGATTTTT ACCCCATTTA TATCTTAACT CTTATTTCTT TATCTTCAAT AAGTATTATT
TTAAATACAA CTGAGCTTTT AATTGGTGAA AAGTTAGTCG ATTTGAAAAA TAATGATGTG
TTGGCAATAT CAATAGGTAT TTTTATATGT GGATTTTTCA GTGTATTATT TTATTTAGTA
TATATTAAAT TCGGTAGAAA TTATAGAATA TCTTTTAATG AATCTAGAGT TGGCAGAATA
TTAGGTTCGA TAGGTGTAAT TACATTGATT GTTGTTTTGT TTCTTTCAGC ATTATTATTG
TATTCAATTA GATTCAGATC TTTTGCTTAA
 
Protein sequence
MKLLDYIFYK VSKYYQGDAN PDFYPIYILT LISLSSISII LNTTELLIGE KLVDLKNNDV 
LAISIGIFIC GFFSVLFYLV YIKFGRNYRI SFNESRVGRI LGSIGVITLI VVLFLSALLL
YSIRFRSFA