Gene CHU_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1283 
Symbol 
ID4185982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1497782 
End bp1499335 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content38% 
IMG OID638071277 
Producthypothetical protein 
Protein accessionYP_677895 
Protein GI110637688 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.608046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.929249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGACA AAAAAATACT TTTTTCAGAA GAAATAAACG CTAAATATAA TACTAACGGA 
GATTATATAG TTCTGGGCAG TGCACTATAT GAAGGCGAAT GTTTACCGGA TGCACATATC
AAATTGCCTT TAAAAACACT GAACAGGCAT GGAATGATTG CCGGTGCTAC CGGTACAGGT
AAAACAAAAA CACTACAGAC AATTGCTGAA TCTCTTTCAT TAAAGGGTAT TCCAACCTTA
ATGATGGATA TTAAAGGTGA TTTGAGCGGT ATTGCTGCAA GCGGAACAAC AAATGCTAAA
ATAGAAGAAA GACAATCTAA AATAGGTCTC CCATTCGAAC CTCAGGGATT TCCGATCGAG
ATTTTCAGTT TATCAAAAGA GAAAGGGGTT CGTTTACGTG CAACTGTTTC TGAATTCGGA
CCGGTATTAT TTTCAAAAAT ATTAGGACTG AATGATACAC AAAGCGGTAT TGTTTCCCTC
ATCTTTAAAT TCTGCGACGA TGAACGTTTA CCGCTTCTGG ACCTGGCAGA TTTCAAACGT
TTGATTCAGT ATATTACCAA TGAAGGTAAA GCCCGGATTG AAAAAGAATA TGGAAAAATA
TCTTCTACTT CTACTTCAAC CATCTTGCGA AAAGTAATTG AGTTAGAGCA ACAAGGAGCA
GATTTATTTT TTGGGGAATA CTCTTTTGAA GTAGATGATC TGTTACGCAA AGATGCTTCA
GGAAAGGGTT ATATATCGAT TATGAAAGTG ACCGATATTC AGGACAGGCC TAAATTGTTC
TCAACATTTA TGCTAAGTTT ATTGTCGGAG ATATACAGCA CATTTCCGGA AGTTGGTGAT
CAGGAAAAGC CTAAATTAGT ACTGTTTATT GACGAAGCAC ATTTAATCTT TAATGAAGCT
TCCGACGCAT TACTCAATCA GATAGAGACG ATTATCAAGT TAATACGATC TAAAGGTGTA
GGTATATTTT TCTGTACACA AAACCCAATG GATATTCCTG CATCCATCTT AGGTCAGCTT
GGTTTAAAGG TTCAGCATGC ATTACGTGCC TTCACCGCTG CAGATCGCAA GCAGATTAAA
TTAACAGCTG CCAATTATCC GTTATCAGAT TATTACGACA CTGAAAGTCT GCTTACTTCT
ATGGGTATCG GAGAAGCAGC AATTACAGTA CTTACCGAAA AAGGAACGCC TTCTCCCCTT
GCACACACCC TGCTTTGTGC ACCAAGATCA CGCATGGACA TTTTGAATGA TAATGAAATA
GATGCGATCA TTCAACGTTC TGCTTTAAGT AAAAAATACA ACGAAGCGGT TGATCGTAAA
AGCGCTTACG AAATACTGAA TGAAAAATAT TCTGTAAAAG AAGAAGAAAC GGAAGAGCCG
GAAGAAAAAA AATCCAGTTC CCGTAAAAGT TCCCGACCTG AAAAAAGCAC GTTCGAAGAA
GCGATTAACA GCCCGATTGC AAAACAGGTT GGAAGAACAT TGGTACACGA AATTGTCCGC
GGGATCTTTG GCGTATTAGG TGTAAATACT TCTCAACGCA GAAAGAGAAG ATAG
 
Protein sequence
MADKKILFSE EINAKYNTNG DYIVLGSALY EGECLPDAHI KLPLKTLNRH GMIAGATGTG 
KTKTLQTIAE SLSLKGIPTL MMDIKGDLSG IAASGTTNAK IEERQSKIGL PFEPQGFPIE
IFSLSKEKGV RLRATVSEFG PVLFSKILGL NDTQSGIVSL IFKFCDDERL PLLDLADFKR
LIQYITNEGK ARIEKEYGKI SSTSTSTILR KVIELEQQGA DLFFGEYSFE VDDLLRKDAS
GKGYISIMKV TDIQDRPKLF STFMLSLLSE IYSTFPEVGD QEKPKLVLFI DEAHLIFNEA
SDALLNQIET IIKLIRSKGV GIFFCTQNPM DIPASILGQL GLKVQHALRA FTAADRKQIK
LTAANYPLSD YYDTESLLTS MGIGEAAITV LTEKGTPSPL AHTLLCAPRS RMDILNDNEI
DAIIQRSALS KKYNEAVDRK SAYEILNEKY SVKEEETEEP EEKKSSSRKS SRPEKSTFEE
AINSPIAKQV GRTLVHEIVR GIFGVLGVNT SQRRKRR