| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1273 |
|---|
| Symbol | hisF |
|---|
| ID | 4185972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1483730 |
|---|
| End bp | 1484485 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638071267 |
|---|
| Product | imidazole glycerol phosphate synthase, subunit B |
|---|
| Protein accession | YP_677885 |
|---|
| Protein GI | 110637678 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.332554 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTACAA AACGTATCAT ACCTTGTCTG GATGTTAAAG ACGGAAAAAC AGTAAAAGGA
GTAAATTTCT TAAACCTGAG AGATGCCGGT GATCCTGTTG AATTGGGCGC TTTGTATTCT
CAGCAAGGGG CAGACGAACT TGTATTTTTA GATATCACAG CTACATTGGA AAAAAGAGGT
ACACTGGTTG AACTTGTTAA GCGTGTAGCA CAACATATAA ATATTCCCTT CACTATTGGC
GGTGGTATTG GTTCCATTGA AGATGTGTCC GCTTGCCTGA ATGCCGGTGC AGATAAAGTT
TCTGTAAACT CTTCTGCAAT TAAAAATCCC GCATTGATTG ATCAGTTGTC TAAGGAGTTT
GGTAATCAAT GTATCGTTGT TGCAATCGAT ACCCGAAACG TTGGGGGAAT GAATCTGGTT
CATTCACATG GAGGCACAAA ACCTACAGAC CTGGATACGA TTGCATGGGC GAAAGAGATG
CAGGAACGTG GCGCAGGAGA ATTACTTCTC ACGTCAATGG ATAAGGATGG AACCAAAGCT
GGTTTTGCAA ATGAATTGAC AGCATATATA TCTACACATG TTTCCATTCC CATCATTGCA
TCAGGCGGTG CCGGTACGAT GGAACATTTT ACAGATGTAT TTACACTCGG GAAAGCAGAT
GCTGCCTTGG CTGCAAGCAT TTTCCACTTT AAAGAAATTG CTATACCTGA ATTAAAATCA
TATTTATCCG GAAAAGGGAT TCATATGAGA AAGTAA
|
|---|
| Protein sequence | MLTKRIIPCL DVKDGKTVKG VNFLNLRDAG DPVELGALYS QQGADELVFL DITATLEKRG
TLVELVKRVA QHINIPFTIG GGIGSIEDVS ACLNAGADKV SVNSSAIKNP ALIDQLSKEF
GNQCIVVAID TRNVGGMNLV HSHGGTKPTD LDTIAWAKEM QERGAGELLL TSMDKDGTKA
GFANELTAYI STHVSIPIIA SGGAGTMEHF TDVFTLGKAD AALAASIFHF KEIAIPELKS
YLSGKGIHMR K
|
|---|
| |