Gene CHU_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1265 
SymbolnarQ 
ID4186957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1476087 
End bp1477844 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content40% 
IMG OID638071259 
Producttwo-component sensor histidine kinase 
Protein accessionYP_677877 
Protein GI110637670 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCCA TTGCATTGTC TTTGATTGCA ATGATTACCA TATTAAGTCA GATCTTAATT 
CAACAATACT TAAGTAGCCA GGTTACGGAT TCCCACGTCA TTAATATTGC TGCGCGTCAG
CGTACATACA GTCAGTCGCT AAGCAAAACC GCATTGCTGA TCGAGTCCGG GAATGATATA
GAAACCAATC GGAAAGAGTT TGCAAATACC TTACGCCAAT GGCAAAAGTC GCACGAAGCG
CTCAAAGGCG GCGGCAGTGA TTTTATGAAC CTTCCGGCCA ATGACCGGGA TGAGTTAAAA
GAAATGTTCG GCATTATTGA AGAACCGTAT GCCGCTATTT TAGGTGCTTC CAACGGCATG
CTCAAGGAAC TGTATAGCCC GAAAGCACTT GACTCCATGA ATCTGAAAGC ATACATAAGA
ACCATTCTTG AAAATGAACG CATGTATTTA TTGGGCATGG AACTGATTGT ATTTGATTAC
GATCGTTTTT ACCGGAATGG GGTGAAGAAG TTAAAAGAAA TTGAATATAT TCTGTTATAC
ATCGTGTTGG TAAGCTTGTT TCTGGAAGCC GTTTTTATTT TTTATCCGCT AGCCGTTCGT
GTGAAACAAA ACATGAAGGA TTTGGTAGAG TCGGAAACAA ATGCCAAGAA TCTGGCCACG
CAGCTGCAGG AAGCGAACAC GATACGAGAA CAATCGCATA AAGAATTCCG GGATATAAAT
TATGCCCTTG AAAAGGCCAC GTACGTTGTA AAGACCGATC AATACGGGCA CATTATTTAT
GCCAACGATA AGTATTGCCA CGTTACGCGC TACAACATGG GTGAGCTGAT CGGAAAGCCT
TTGTTCTATA ACAATATGGG CGGCAAGGAA AGTATCATCT ACGAGCATAT AAATAATCAG
GAGCGTCGCA AAGAAGTATG GCAGGGAGAG ATCTTTGATC ATGCTTCCGA TGGTACAGGC
TTCTGGCTCG ATGTTACCAT GATGCCGATC ATAGATAATA AAGGTTCGTT GTATCAGTTT
CTGGTTGTTT GCACAGATAT TACAAAACGT AAAAATACAG AACGGGAGTT ACTGCTGCTT
ACAGAAGAAA AAATAAAACG TCAGGGAGCA GAGCAAAAAA TAATTTCATA TTCTATCATT
AACGGACAGG AAAAAGAACG CACCCGCATT GCTGCGGAAA TTCACGATGG TATCGGACAA
ATGCTTACAA GTCTGCGTAT GAAGATGGAG ATGATCGAAA ATAAAAATAC ACATCTGGGT
AGTGATATAA CCGAACTTAC CGATCTGTTA CAGATGGTCA TTAATGAAAC GAAAAAAATA
TGCTCAGATC TCTTGCCAAG TGTACTGGAT GATTTTGGTT TGAGCGCAGC CATCCGCGAG
TTACAGAAGA TGTGCTCAGC AACAACTGAA ATGTCCTTTG ATCTGGATGA TGAACTGGAA
CCGCATGCCT TACCGCGTGA AGTGGAAATA GGTATATTCC GTATTTTACA GGAAGGGCTA
AATAATGCCA TTAAACATTC AAAAGGATCA AACGTTTTTA TTCATATTAG TAATGACGAA
AAAAATGTAC ATTTATTTGT GAAGGATAAC GGGAAAGGAT TTGATTTCGA TGAAAAAAAA
TTATTAAGCC GAGAATTTAT AGCAAAGTCT AACGGGTTGC GTAATATGAA AGAGCGTGCA
GAATTATTAG GCGGTAAATT TGTAGTAAAA TCGCTGATCG GAGAGGGCAC AACACTTCAG
GTACAGATAC CTATTTAA
 
Protein sequence
MYAIALSLIA MITILSQILI QQYLSSQVTD SHVINIAARQ RTYSQSLSKT ALLIESGNDI 
ETNRKEFANT LRQWQKSHEA LKGGGSDFMN LPANDRDELK EMFGIIEEPY AAILGASNGM
LKELYSPKAL DSMNLKAYIR TILENERMYL LGMELIVFDY DRFYRNGVKK LKEIEYILLY
IVLVSLFLEA VFIFYPLAVR VKQNMKDLVE SETNAKNLAT QLQEANTIRE QSHKEFRDIN
YALEKATYVV KTDQYGHIIY ANDKYCHVTR YNMGELIGKP LFYNNMGGKE SIIYEHINNQ
ERRKEVWQGE IFDHASDGTG FWLDVTMMPI IDNKGSLYQF LVVCTDITKR KNTERELLLL
TEEKIKRQGA EQKIISYSII NGQEKERTRI AAEIHDGIGQ MLTSLRMKME MIENKNTHLG
SDITELTDLL QMVINETKKI CSDLLPSVLD DFGLSAAIRE LQKMCSATTE MSFDLDDELE
PHALPREVEI GIFRILQEGL NNAIKHSKGS NVFIHISNDE KNVHLFVKDN GKGFDFDEKK
LLSREFIAKS NGLRNMKERA ELLGGKFVVK SLIGEGTTLQ VQIPI