Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1261 |
Symbol | ureC |
ID | 4186953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1471501 |
End bp | 1473213 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638071255 |
Product | urease subunit alpha |
Protein accession | YP_677873 |
Protein GI | 110637666 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.246946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.705398 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATATA TACTATCAAG AAAAAGTTAT GCAGACATGT TTGGCGTAAC TACCGGAGAT AAAATCACCT TAGGCGACAC CAATCTTCTG GTGCGCGTTG AAAAGGATCT TACGGTGTAT GGAGAAGAAT GTAAATTCGG CGGCGGCAAG GTATTACGCG ACGGCATGGG ACAGGCTTCC GGCTATAAAT CGGATGATGT ATTAGACTTA CTTATTACCA ATGCATTGAT CATTGATTAT ACAGGTATTT ATAAAGCTGA CATCGGTATT AAGAACGGAC ACATTAAGGC AATCGGTAAA AGCGGCAATC CACATATCAT GCCGGGTGTG CACCCGGATA TGATTGCAGG AACGGTTACG GAAGTAATTG CAGGGGAAGG TATGATCATT ACTGCAGGCG GGATTGATAA TCACATCCAT TACATCTGTC CGCAGCAGAT GAACGAAGCG CTCGCTTCGG GTATTACAAC CTTTATCGGC GGCGGCACCG GTCCTGCAAC AGGAACAAAA GCAACTACCT GTACACCCGG TGCCTTTCAC ATTGAAATGA TGTTGAAAGC AACCGATAAC ATCCCGATGA ATATTGGATT TCTTGGTAAA GGGAATACTT CCCATCCGGA AGAGATCGAA GAACAGATCA AAGCTGGCGC GCTTGGTTTA AAGCTTCATG AAGACTGGGG TACAACACCC GCTGCTATTG ATAACTGTTT GTCAGTAGCA GAAAAATACG ACGTACAGGT GTGTATTCAT ACGGATACCT TAAACGAAAG TGGTTTTGTG GAATCCAGCC GCGCAGCATT CAAAGGCAGA ACAATTCATA CCTATCACAC AGAGGGTGCA GGCGGCGGCC ACGCGCCTGA TATTATAGTG TTATGCGGAG ATCCGGATGT ACTGCCTTCT TCAACCAATC CGACAAAACC ATTTACAGTA AATACCATTG ATGAACACCT GGATATGCTG ATGGTTTGTC ACCATTTAGA CCGGAACATT CCCGAAGATG TGTCCTTTGC GGAAAGCCGT ATCCGTGGCG AGACAATTGC TGCTGAAGAT ATTCTGCATG ATATGGGTGC CTTGTCAATG CTGTCGTCTG ATTCACAGGC AATGGGCAGA GTAGGAGAAG TAATCTGCCG TACCTGGCAG ACAGCACATA AAATGAAAGA GCAACGCGGT TTGCTGGAAG AAGATAAACA GATTGACGCG GATAACTTTC GTGTAAAAAG ATATATTGCC AAGTATACGA TCAACCCGGC GATCGCGCAC GGCTGCAGTC ATGTGATCGG TTCGGTTGAA GTAGGTAAGC TGGCAGACCT TGTTGTCTGG CAGCCGGATT TCTTCGGAAG CAGACCGGAA TTGATTTTAA AAGGAGGCGT AATCGTACAG GCGCAGATGG GGGATCCCAA TGCATCCATA CCAACGCCGC AGCCTTTCTT CTCAAGGCCT ATGTTTGGTG CGATGGGTAA AGCAACAGGA GCAACCTCAT TAGCATTTGT TTCGGCAGCG TCGGAAGAAA CCGTAAACGG ATATGGGCTG AATAAAAAAG TCACTCCGGT TGTGGGCTGC CGTTCTGTGA AGAAAAAAGA CATGAAGCTG AATGATTTTC TTCCGGATAT TAAAGTAGAT GCAGAAACGT ACAAAGTAAC CGTCAACGGT GAATGGATCA CCTGCGCACC GGCAAAGAAG CTGCCGCTGG CACAGCTTTA CAATTTGTTT TAA
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Protein sequence | MSYILSRKSY ADMFGVTTGD KITLGDTNLL VRVEKDLTVY GEECKFGGGK VLRDGMGQAS GYKSDDVLDL LITNALIIDY TGIYKADIGI KNGHIKAIGK SGNPHIMPGV HPDMIAGTVT EVIAGEGMII TAGGIDNHIH YICPQQMNEA LASGITTFIG GGTGPATGTK ATTCTPGAFH IEMMLKATDN IPMNIGFLGK GNTSHPEEIE EQIKAGALGL KLHEDWGTTP AAIDNCLSVA EKYDVQVCIH TDTLNESGFV ESSRAAFKGR TIHTYHTEGA GGGHAPDIIV LCGDPDVLPS STNPTKPFTV NTIDEHLDML MVCHHLDRNI PEDVSFAESR IRGETIAAED ILHDMGALSM LSSDSQAMGR VGEVICRTWQ TAHKMKEQRG LLEEDKQIDA DNFRVKRYIA KYTINPAIAH GCSHVIGSVE VGKLADLVVW QPDFFGSRPE LILKGGVIVQ AQMGDPNASI PTPQPFFSRP MFGAMGKATG ATSLAFVSAA SEETVNGYGL NKKVTPVVGC RSVKKKDMKL NDFLPDIKVD AETYKVTVNG EWITCAPAKK LPLAQLYNLF
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