Gene CHU_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1261 
SymbolureC 
ID4186953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1471501 
End bp1473213 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content46% 
IMG OID638071255 
Producturease subunit alpha 
Protein accessionYP_677873 
Protein GI110637666 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0804] Urea amidohydrolase (urease) alpha subunit 
TIGRFAM ID[TIGR01792] urease, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.246946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.705398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATATA TACTATCAAG AAAAAGTTAT GCAGACATGT TTGGCGTAAC TACCGGAGAT 
AAAATCACCT TAGGCGACAC CAATCTTCTG GTGCGCGTTG AAAAGGATCT TACGGTGTAT
GGAGAAGAAT GTAAATTCGG CGGCGGCAAG GTATTACGCG ACGGCATGGG ACAGGCTTCC
GGCTATAAAT CGGATGATGT ATTAGACTTA CTTATTACCA ATGCATTGAT CATTGATTAT
ACAGGTATTT ATAAAGCTGA CATCGGTATT AAGAACGGAC ACATTAAGGC AATCGGTAAA
AGCGGCAATC CACATATCAT GCCGGGTGTG CACCCGGATA TGATTGCAGG AACGGTTACG
GAAGTAATTG CAGGGGAAGG TATGATCATT ACTGCAGGCG GGATTGATAA TCACATCCAT
TACATCTGTC CGCAGCAGAT GAACGAAGCG CTCGCTTCGG GTATTACAAC CTTTATCGGC
GGCGGCACCG GTCCTGCAAC AGGAACAAAA GCAACTACCT GTACACCCGG TGCCTTTCAC
ATTGAAATGA TGTTGAAAGC AACCGATAAC ATCCCGATGA ATATTGGATT TCTTGGTAAA
GGGAATACTT CCCATCCGGA AGAGATCGAA GAACAGATCA AAGCTGGCGC GCTTGGTTTA
AAGCTTCATG AAGACTGGGG TACAACACCC GCTGCTATTG ATAACTGTTT GTCAGTAGCA
GAAAAATACG ACGTACAGGT GTGTATTCAT ACGGATACCT TAAACGAAAG TGGTTTTGTG
GAATCCAGCC GCGCAGCATT CAAAGGCAGA ACAATTCATA CCTATCACAC AGAGGGTGCA
GGCGGCGGCC ACGCGCCTGA TATTATAGTG TTATGCGGAG ATCCGGATGT ACTGCCTTCT
TCAACCAATC CGACAAAACC ATTTACAGTA AATACCATTG ATGAACACCT GGATATGCTG
ATGGTTTGTC ACCATTTAGA CCGGAACATT CCCGAAGATG TGTCCTTTGC GGAAAGCCGT
ATCCGTGGCG AGACAATTGC TGCTGAAGAT ATTCTGCATG ATATGGGTGC CTTGTCAATG
CTGTCGTCTG ATTCACAGGC AATGGGCAGA GTAGGAGAAG TAATCTGCCG TACCTGGCAG
ACAGCACATA AAATGAAAGA GCAACGCGGT TTGCTGGAAG AAGATAAACA GATTGACGCG
GATAACTTTC GTGTAAAAAG ATATATTGCC AAGTATACGA TCAACCCGGC GATCGCGCAC
GGCTGCAGTC ATGTGATCGG TTCGGTTGAA GTAGGTAAGC TGGCAGACCT TGTTGTCTGG
CAGCCGGATT TCTTCGGAAG CAGACCGGAA TTGATTTTAA AAGGAGGCGT AATCGTACAG
GCGCAGATGG GGGATCCCAA TGCATCCATA CCAACGCCGC AGCCTTTCTT CTCAAGGCCT
ATGTTTGGTG CGATGGGTAA AGCAACAGGA GCAACCTCAT TAGCATTTGT TTCGGCAGCG
TCGGAAGAAA CCGTAAACGG ATATGGGCTG AATAAAAAAG TCACTCCGGT TGTGGGCTGC
CGTTCTGTGA AGAAAAAAGA CATGAAGCTG AATGATTTTC TTCCGGATAT TAAAGTAGAT
GCAGAAACGT ACAAAGTAAC CGTCAACGGT GAATGGATCA CCTGCGCACC GGCAAAGAAG
CTGCCGCTGG CACAGCTTTA CAATTTGTTT TAA
 
Protein sequence
MSYILSRKSY ADMFGVTTGD KITLGDTNLL VRVEKDLTVY GEECKFGGGK VLRDGMGQAS 
GYKSDDVLDL LITNALIIDY TGIYKADIGI KNGHIKAIGK SGNPHIMPGV HPDMIAGTVT
EVIAGEGMII TAGGIDNHIH YICPQQMNEA LASGITTFIG GGTGPATGTK ATTCTPGAFH
IEMMLKATDN IPMNIGFLGK GNTSHPEEIE EQIKAGALGL KLHEDWGTTP AAIDNCLSVA
EKYDVQVCIH TDTLNESGFV ESSRAAFKGR TIHTYHTEGA GGGHAPDIIV LCGDPDVLPS
STNPTKPFTV NTIDEHLDML MVCHHLDRNI PEDVSFAESR IRGETIAAED ILHDMGALSM
LSSDSQAMGR VGEVICRTWQ TAHKMKEQRG LLEEDKQIDA DNFRVKRYIA KYTINPAIAH
GCSHVIGSVE VGKLADLVVW QPDFFGSRPE LILKGGVIVQ AQMGDPNASI PTPQPFFSRP
MFGAMGKATG ATSLAFVSAA SEETVNGYGL NKKVTPVVGC RSVKKKDMKL NDFLPDIKVD
AETYKVTVNG EWITCAPAKK LPLAQLYNLF