| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1257 |
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| Symbol | livM |
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| ID | 4186949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1468007 |
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| End bp | 1469098 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638071251 |
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| Product | branched-chain amino acid ABC transporter, permease component |
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| Protein accession | YP_677869 |
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| Protein GI | 110637662 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.606412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT ATTTCAATAG TAATTCGTTG TTCTATATCA TTCTTATCGG TGTGTTCTTA
ATTATTATGC CCATAGGAAA TATGCTGGGT TTTGTTTCAA ACAATACCAT TTCGTTGTGG
GGAAGATATT TTTGTTTTGC CATTGCTGCA CTAGGTGTAG ATCTGATCTG GGGTTATTCA
GGTGTGTTGT CTATGTGCCA GGCAGTTTTC TTCTGTCTGG GCGGTTATGC TATTGCCATG
CACATGCTGC TGGTGGCAGG CGGAGAGGAT CCTTCCGGAA TCCCGGATTT CATGGTATGG
AATCAGGTGG ATGTATTGCC GGCCTTCTGG ATACCTTTTC ATTCCTTTGG TTTATCATTT
CTTCTTGCGT TGCTGATTCC CGGAATCTTT GCATTCATCT TTGGCTACTT CGTATTCAGA
AGCCGCATCA AAGGGGTGTA TCTGGCCATT ATCACACAGG CGCTTGCGTT GGCTATGTGG
TTGATTTTTC TCCGTAATGA AACCATGCTG GGCGGAACCA ACGGCTTAAC CGGGTTTAAA
ACATTGCTCG GTTTTTCGCT TTCCAGTCCA TCAACCAAAT TAGGTCTGTA CATAGTATCC
TTTCTGGTGA TGTTCGGTTT ATTTCTGTTC TGTAAATGGC TGGTAAACTC TAAGTTTGGT
AAAGTACTGG TAGCGATCCG CGATAGTGAA TCACGGGTAA GTTATACGGC TTACAATGTT
GTAAATTATA AGCTGGCCGT GTTTGTGATT GCAGCTGTGG TTGCGGCAAT CGGAGGTATG
CTGTATGTGC CGCAGACGGG TATTATCACG CCGGGCAGAA TGGATGTAAA AGCATCTGTT
GAAATGGTGA TGTGGGTAGC ATTGGGCGGA AGAGGAAGAT TAAAAGGCGC AATCATCGGA
GCCTTGCTGG TGAATTATTT ATACAGTGTC TGCACAAGTA TGTTTCCGGA ATCGTGGTTA
TACATATTAG GCGTGCTGTT TATACTCACG GTTCTTTTCT TTGAAAAAGG GTTCTGGGGA
TTAATTGAAA TGCTCGAAAA TAAAATCAAT TCTTTATCAT CAACTAAATC AGTTTCAAAT
ACGAATTCTT AA
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| Protein sequence | MKKYFNSNSL FYIILIGVFL IIMPIGNMLG FVSNNTISLW GRYFCFAIAA LGVDLIWGYS
GVLSMCQAVF FCLGGYAIAM HMLLVAGGED PSGIPDFMVW NQVDVLPAFW IPFHSFGLSF
LLALLIPGIF AFIFGYFVFR SRIKGVYLAI ITQALALAMW LIFLRNETML GGTNGLTGFK
TLLGFSLSSP STKLGLYIVS FLVMFGLFLF CKWLVNSKFG KVLVAIRDSE SRVSYTAYNV
VNYKLAVFVI AAVVAAIGGM LYVPQTGIIT PGRMDVKASV EMVMWVALGG RGRLKGAIIG
ALLVNYLYSV CTSMFPESWL YILGVLFILT VLFFEKGFWG LIEMLENKIN SLSSTKSVSN
TNS
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