Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1251 |
Symbol | |
ID | 4186943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1456036 |
End bp | 1459815 |
Gene Length | 3780 bp |
Protein Length | 1259 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638071244 |
Product | hypothetical protein |
Protein accession | YP_677862 |
Protein GI | 110637656 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCT TCGTTCCGTT ACTGTTTCTG CTTCTTGGAT TACAAGTCTC AATCGCTCAG GAACTTGTTA TCAATGGTGG TGCTGAACTT CCTACTACTA CGGGCTGGAC ACAAAAAACA GCCGGCGATC ACTGGGCCAT TGATGCCCAA CGTCCACCCC ACAGCGGTTC GTATCATTTT TATCCGGAAA ATACCGTGAA TGCAACTTCC GAACTGTATC AGGATATAGA CGTATCAGCC AATGCTGCAC GCATTGATGC AGGAACTGCA AGCTATACGT TTTCAGGCTG GCGCAGAGGA TACCGCAATA CCTCTCCATT CAGTAACGAC ATGGATCGTT CCCAGATCAT TGTTGAATAC CTCGACGTTT CAGGAAATGT ACTGGAAACG TACGATACCG GAAGTGCGGT GTTTTCTGTA TGGACAAACA ATACAGATAC ACGTAATGCA CCAATCGGAA CACGTACGGT CCGCATCCGG CTGATCAGTG TACGTGTTTC AAGCAGCGAT AACGACGGTT ACTACGACGA CATTTCATTT ATTTATAATG CGCCAACCTG TACAGCACCT GCCGGCATTA CACTAACACC TGCTGCTGCC ACACATTACT GCCTTGGAAG TCCGCTCAGC ATATCTGCGG TTGTAAGTCC GGCGAACACA AATTATTACT ATACCTGGTA CCTGAACGGC ACTGCCATTG CACCCGCCAG CAGCACATAC ACGCCGTTTA CAAAACCGGT AACAACCGCT GCGGATGCAG GCATGTATAC CTTACGGGTA GAAGATGGCA ACAACAGTAC AGCAGCCTGC TACCAGGAAG CAAGCGTTAC CATTATCCTG GATGCAGCAC CTGTAGCCGG CATCATCAGC TCTGATCAGG AAATCTGCCT GGGTACCGCA GCTTCTGCTC TGACAGGCAC TGCAAGTACA GGCGGCACAA GCGTAAAATA TTATACATGG CAGCGTTCAA ACACATCGGC TTCCGGTCCA TGGGTAACGG TACAGGCCTA CAGTAGCACA GCTGCCGGCT ATACACCTGC CTCAGCAACA GGTACCTTTT ATTACAGAAG AATCGATTCT TCCGGGGCCT GTGCATCAGT ACCGACAAAT GCAGTAACCA TACGAGTAAA TAACACACTG AAGCTCGACC CGATAACTTC TCTGCTGCGT GATACATTAT GTACCGGAGA ATCCTTTCAG TTGATTCCGC ATATGGCAAT ACCCGTTCCT GCGTCATTAA ACGGCGGCTA TTATTTTACC TGGAAAAAAA TTCAGGAGCC AGCTACAAGT TCTACAGCAG TTGCAGCAGG TTCTTCCATG ACTCATTATC CGTCTGTTGC TATGGCGGCT TTCCTCTCCG ACTCAGGCAC ATATATTTTA ATTACACAAG ACGGTATGTC CGCAAAAAAA TGTAAAGATT CTGTTCAGAT AAAAATTCAT ATAAATAAAG CGCCGGATAC AAAAGCGCTC ATACAATCCA ATCAGGAATT TTGCCTGTCT GCTTCCGCAA CACCGCTTAC AGAAGTGCGT CCGGGAAGCG GTGTTAGCGG CCAGTTATCC TATCAATGGT ATACAACCAA AGACACAACA GGTGTTCCGG CACTTATAAA GATCGCTTCT GCTTCATCGG GTATCAGTTA TGATCCGGGA ACACCCGTGC AAACAAACTA TTATGTACGC AAAGATTCCG TATCATATTG CCCTGCGGTC AAAACCAATT TTCTTAAGGT ACGGGTAAAC AACAAACCGA TATTAGACAG TATTCATCCG CTTGTGAACG ACACCCTATG CAAAAATTTT AATGAACAGT TTCAGCTTAA AGGCTATCTG GATAGTATAA CTGCGGGAAA GGCTTCTTTA AATGGTGGCT ATGTTTTTAC ATGGAAAAAA GTACAGCAGA CAATCGGTAC AACTGTTTTA ACTTCTGCCG GCGCATATAC GGATTATCCG TTAACCAGCC GTGCAGTAGC GGAAGACGAT TCGGGCACGT ATTATCTGAT CGTGCGGGAT GGTTACGGTG CTGCAACCTG TTTCGATTCT ATATCCCTTC ATATTGTTGT ACAGGACAAT TGTGTTGCCA TCAACTGCAG TAAGCCAGAC GCTGTTTCCA TTAAAGTTGC AGCCGGCAGC AGCGATCAGT TATGCGCGGG TACAACACTC ATCTTGCAAA AAGATGTAAT TACGTTCCCT GCTGTGCCTC CTACGTTTGG TTATGTATAT TCATGGGTAC GAACCAACAC GCTCGGCACC GTAACTGTGC AGGGCCCGTC AGCAATGTAT CAGGATCTGA TCGTGAATGC CGTTACAGCT GCTGACAGCG GCCGCTATGA GCTGGTTGTA CAGGATGGCG CGGCAAGCCC TGCCAGCCTG TGTTCGGAAC GTTCACAACC CATTACCATT GTTGTATATG ATCCCGTTAC ACCGGCACGG ATTGGCAGCG ATACGCTGAT CTGCACCGGA AGCACGATCT TGCCTTTTAC GGAACTTCTT GCCAATAGCG GCGGCACCGG AAGCTATGCC CACCAATGGC AATCATCTTC AGACCTGTCC GCATTTACGG ATATAGCAGG TGCAACAGCT ATTACGTATC AACCTCCCGC GATTTCTTCT TCCATCTATT TCAGACGGGC AGACAGGTCC GGCAATTGTG GCGTTGTATA CAGCGATACA GTCTCCGTTA TCACAACAAG CGGCGTAATA CCGGGGAGTA TCACGTCTGC TAACGGAACT ATCTGTTACA ATACCATTCC GCCCCAACCG CTTCTCAGTA CTGGTTCTGC TGCTGGAGGA ACGGGTGGCA ACGGGTCAGA ACTGTATCAA TGGCAGCAAT CAGCGGATAA CATAAACTGG ACGGATATAC CTGGCGCAAC AGCAATAAAT TACAGCGAAA CAAATCCGCT GCAAGATACC ACCTATTACC GCAGACGTGT AATCATGGGC CCGGGCACAT GTGACCAGGC CTACACAACA TCTGTTGTAT TAAATGTATC TGCACCATTT ACACCCGGTA CTATTGGCAA AGATACTGCA GTCTGCTCGG GTTCATCCAT CAGGATAAAA GAATTGACAA CTGCCACAGG AAATAATATA CAGTACAAAT GGATCGCTTC GATTACCAAA GGTGCTTCGT GGTTTGATGC TCCCGGGGTT TCAACCGCAA AAGAGTATAT AACACCCGGC TTAAACGATT CTATCTGGTA CAAACGTGTA GCAATTTCCA GCTGCAGTCA GGATTCCTCT AATCTGGTGC GGGTTGATGT GGCTGTGACA CCCGCTGCAT ATGCAGGCAC TGATACGACC GTACAAAAAA ACAGCATCAT TCAGTTACAG GGAAGGGTTA TCGGCTCGGT AAATTATGTA TGGATACCGT CAACACGTTT AAGTAATGCG AATATATTAA ATCCGGATGC AATGATTGTC AGTACCATTA CCTATACACT TAAAGCAACC GATGTAACAG GCACGTGCAG TGCGGTAAGC ATTGTTACCA TCACCGTTGA AGACCCAATC GGTGTACCAA ATGTCATTAC ACCGAATGGC GATGGCACCA ATGACACTTG GATCATCGAA CGTATTGAAA ATTATCCCAA TGCAATCTGT ACCATATACA ACCGCTGGGG AAATATTGTA TGGAAAGCCG GGAACGGTGC TTTTCAATGG AACGGAACGA ATTACAGAAA CGGAGAAGCG TTACCGGACG GAACATATTT TTACATCATC GATCTCAAAA GCACTGCTTA TCCGGAACCT TATACCGGAT ATATACAATT GGTTCGATAG
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Protein sequence | MKFFVPLLFL LLGLQVSIAQ ELVINGGAEL PTTTGWTQKT AGDHWAIDAQ RPPHSGSYHF YPENTVNATS ELYQDIDVSA NAARIDAGTA SYTFSGWRRG YRNTSPFSND MDRSQIIVEY LDVSGNVLET YDTGSAVFSV WTNNTDTRNA PIGTRTVRIR LISVRVSSSD NDGYYDDISF IYNAPTCTAP AGITLTPAAA THYCLGSPLS ISAVVSPANT NYYYTWYLNG TAIAPASSTY TPFTKPVTTA ADAGMYTLRV EDGNNSTAAC YQEASVTIIL DAAPVAGIIS SDQEICLGTA ASALTGTAST GGTSVKYYTW QRSNTSASGP WVTVQAYSST AAGYTPASAT GTFYYRRIDS SGACASVPTN AVTIRVNNTL KLDPITSLLR DTLCTGESFQ LIPHMAIPVP ASLNGGYYFT WKKIQEPATS STAVAAGSSM THYPSVAMAA FLSDSGTYIL ITQDGMSAKK CKDSVQIKIH INKAPDTKAL IQSNQEFCLS ASATPLTEVR PGSGVSGQLS YQWYTTKDTT GVPALIKIAS ASSGISYDPG TPVQTNYYVR KDSVSYCPAV KTNFLKVRVN NKPILDSIHP LVNDTLCKNF NEQFQLKGYL DSITAGKASL NGGYVFTWKK VQQTIGTTVL TSAGAYTDYP LTSRAVAEDD SGTYYLIVRD GYGAATCFDS ISLHIVVQDN CVAINCSKPD AVSIKVAAGS SDQLCAGTTL ILQKDVITFP AVPPTFGYVY SWVRTNTLGT VTVQGPSAMY QDLIVNAVTA ADSGRYELVV QDGAASPASL CSERSQPITI VVYDPVTPAR IGSDTLICTG STILPFTELL ANSGGTGSYA HQWQSSSDLS AFTDIAGATA ITYQPPAISS SIYFRRADRS GNCGVVYSDT VSVITTSGVI PGSITSANGT ICYNTIPPQP LLSTGSAAGG TGGNGSELYQ WQQSADNINW TDIPGATAIN YSETNPLQDT TYYRRRVIMG PGTCDQAYTT SVVLNVSAPF TPGTIGKDTA VCSGSSIRIK ELTTATGNNI QYKWIASITK GASWFDAPGV STAKEYITPG LNDSIWYKRV AISSCSQDSS NLVRVDVAVT PAAYAGTDTT VQKNSIIQLQ GRVIGSVNYV WIPSTRLSNA NILNPDAMIV STITYTLKAT DVTGTCSAVS IVTITVEDPI GVPNVITPNG DGTNDTWIIE RIENYPNAIC TIYNRWGNIV WKAGNGAFQW NGTNYRNGEA LPDGTYFYII DLKSTAYPEP YTGYIQLVR
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