Gene CHU_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1251 
Symbol 
ID4186943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1456036 
End bp1459815 
Gene Length3780 bp 
Protein Length1259 aa 
Translation table11 
GC content47% 
IMG OID638071244 
Producthypothetical protein 
Protein accessionYP_677862 
Protein GI110637656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT TCGTTCCGTT ACTGTTTCTG CTTCTTGGAT TACAAGTCTC AATCGCTCAG 
GAACTTGTTA TCAATGGTGG TGCTGAACTT CCTACTACTA CGGGCTGGAC ACAAAAAACA
GCCGGCGATC ACTGGGCCAT TGATGCCCAA CGTCCACCCC ACAGCGGTTC GTATCATTTT
TATCCGGAAA ATACCGTGAA TGCAACTTCC GAACTGTATC AGGATATAGA CGTATCAGCC
AATGCTGCAC GCATTGATGC AGGAACTGCA AGCTATACGT TTTCAGGCTG GCGCAGAGGA
TACCGCAATA CCTCTCCATT CAGTAACGAC ATGGATCGTT CCCAGATCAT TGTTGAATAC
CTCGACGTTT CAGGAAATGT ACTGGAAACG TACGATACCG GAAGTGCGGT GTTTTCTGTA
TGGACAAACA ATACAGATAC ACGTAATGCA CCAATCGGAA CACGTACGGT CCGCATCCGG
CTGATCAGTG TACGTGTTTC AAGCAGCGAT AACGACGGTT ACTACGACGA CATTTCATTT
ATTTATAATG CGCCAACCTG TACAGCACCT GCCGGCATTA CACTAACACC TGCTGCTGCC
ACACATTACT GCCTTGGAAG TCCGCTCAGC ATATCTGCGG TTGTAAGTCC GGCGAACACA
AATTATTACT ATACCTGGTA CCTGAACGGC ACTGCCATTG CACCCGCCAG CAGCACATAC
ACGCCGTTTA CAAAACCGGT AACAACCGCT GCGGATGCAG GCATGTATAC CTTACGGGTA
GAAGATGGCA ACAACAGTAC AGCAGCCTGC TACCAGGAAG CAAGCGTTAC CATTATCCTG
GATGCAGCAC CTGTAGCCGG CATCATCAGC TCTGATCAGG AAATCTGCCT GGGTACCGCA
GCTTCTGCTC TGACAGGCAC TGCAAGTACA GGCGGCACAA GCGTAAAATA TTATACATGG
CAGCGTTCAA ACACATCGGC TTCCGGTCCA TGGGTAACGG TACAGGCCTA CAGTAGCACA
GCTGCCGGCT ATACACCTGC CTCAGCAACA GGTACCTTTT ATTACAGAAG AATCGATTCT
TCCGGGGCCT GTGCATCAGT ACCGACAAAT GCAGTAACCA TACGAGTAAA TAACACACTG
AAGCTCGACC CGATAACTTC TCTGCTGCGT GATACATTAT GTACCGGAGA ATCCTTTCAG
TTGATTCCGC ATATGGCAAT ACCCGTTCCT GCGTCATTAA ACGGCGGCTA TTATTTTACC
TGGAAAAAAA TTCAGGAGCC AGCTACAAGT TCTACAGCAG TTGCAGCAGG TTCTTCCATG
ACTCATTATC CGTCTGTTGC TATGGCGGCT TTCCTCTCCG ACTCAGGCAC ATATATTTTA
ATTACACAAG ACGGTATGTC CGCAAAAAAA TGTAAAGATT CTGTTCAGAT AAAAATTCAT
ATAAATAAAG CGCCGGATAC AAAAGCGCTC ATACAATCCA ATCAGGAATT TTGCCTGTCT
GCTTCCGCAA CACCGCTTAC AGAAGTGCGT CCGGGAAGCG GTGTTAGCGG CCAGTTATCC
TATCAATGGT ATACAACCAA AGACACAACA GGTGTTCCGG CACTTATAAA GATCGCTTCT
GCTTCATCGG GTATCAGTTA TGATCCGGGA ACACCCGTGC AAACAAACTA TTATGTACGC
AAAGATTCCG TATCATATTG CCCTGCGGTC AAAACCAATT TTCTTAAGGT ACGGGTAAAC
AACAAACCGA TATTAGACAG TATTCATCCG CTTGTGAACG ACACCCTATG CAAAAATTTT
AATGAACAGT TTCAGCTTAA AGGCTATCTG GATAGTATAA CTGCGGGAAA GGCTTCTTTA
AATGGTGGCT ATGTTTTTAC ATGGAAAAAA GTACAGCAGA CAATCGGTAC AACTGTTTTA
ACTTCTGCCG GCGCATATAC GGATTATCCG TTAACCAGCC GTGCAGTAGC GGAAGACGAT
TCGGGCACGT ATTATCTGAT CGTGCGGGAT GGTTACGGTG CTGCAACCTG TTTCGATTCT
ATATCCCTTC ATATTGTTGT ACAGGACAAT TGTGTTGCCA TCAACTGCAG TAAGCCAGAC
GCTGTTTCCA TTAAAGTTGC AGCCGGCAGC AGCGATCAGT TATGCGCGGG TACAACACTC
ATCTTGCAAA AAGATGTAAT TACGTTCCCT GCTGTGCCTC CTACGTTTGG TTATGTATAT
TCATGGGTAC GAACCAACAC GCTCGGCACC GTAACTGTGC AGGGCCCGTC AGCAATGTAT
CAGGATCTGA TCGTGAATGC CGTTACAGCT GCTGACAGCG GCCGCTATGA GCTGGTTGTA
CAGGATGGCG CGGCAAGCCC TGCCAGCCTG TGTTCGGAAC GTTCACAACC CATTACCATT
GTTGTATATG ATCCCGTTAC ACCGGCACGG ATTGGCAGCG ATACGCTGAT CTGCACCGGA
AGCACGATCT TGCCTTTTAC GGAACTTCTT GCCAATAGCG GCGGCACCGG AAGCTATGCC
CACCAATGGC AATCATCTTC AGACCTGTCC GCATTTACGG ATATAGCAGG TGCAACAGCT
ATTACGTATC AACCTCCCGC GATTTCTTCT TCCATCTATT TCAGACGGGC AGACAGGTCC
GGCAATTGTG GCGTTGTATA CAGCGATACA GTCTCCGTTA TCACAACAAG CGGCGTAATA
CCGGGGAGTA TCACGTCTGC TAACGGAACT ATCTGTTACA ATACCATTCC GCCCCAACCG
CTTCTCAGTA CTGGTTCTGC TGCTGGAGGA ACGGGTGGCA ACGGGTCAGA ACTGTATCAA
TGGCAGCAAT CAGCGGATAA CATAAACTGG ACGGATATAC CTGGCGCAAC AGCAATAAAT
TACAGCGAAA CAAATCCGCT GCAAGATACC ACCTATTACC GCAGACGTGT AATCATGGGC
CCGGGCACAT GTGACCAGGC CTACACAACA TCTGTTGTAT TAAATGTATC TGCACCATTT
ACACCCGGTA CTATTGGCAA AGATACTGCA GTCTGCTCGG GTTCATCCAT CAGGATAAAA
GAATTGACAA CTGCCACAGG AAATAATATA CAGTACAAAT GGATCGCTTC GATTACCAAA
GGTGCTTCGT GGTTTGATGC TCCCGGGGTT TCAACCGCAA AAGAGTATAT AACACCCGGC
TTAAACGATT CTATCTGGTA CAAACGTGTA GCAATTTCCA GCTGCAGTCA GGATTCCTCT
AATCTGGTGC GGGTTGATGT GGCTGTGACA CCCGCTGCAT ATGCAGGCAC TGATACGACC
GTACAAAAAA ACAGCATCAT TCAGTTACAG GGAAGGGTTA TCGGCTCGGT AAATTATGTA
TGGATACCGT CAACACGTTT AAGTAATGCG AATATATTAA ATCCGGATGC AATGATTGTC
AGTACCATTA CCTATACACT TAAAGCAACC GATGTAACAG GCACGTGCAG TGCGGTAAGC
ATTGTTACCA TCACCGTTGA AGACCCAATC GGTGTACCAA ATGTCATTAC ACCGAATGGC
GATGGCACCA ATGACACTTG GATCATCGAA CGTATTGAAA ATTATCCCAA TGCAATCTGT
ACCATATACA ACCGCTGGGG AAATATTGTA TGGAAAGCCG GGAACGGTGC TTTTCAATGG
AACGGAACGA ATTACAGAAA CGGAGAAGCG TTACCGGACG GAACATATTT TTACATCATC
GATCTCAAAA GCACTGCTTA TCCGGAACCT TATACCGGAT ATATACAATT GGTTCGATAG
 
Protein sequence
MKFFVPLLFL LLGLQVSIAQ ELVINGGAEL PTTTGWTQKT AGDHWAIDAQ RPPHSGSYHF 
YPENTVNATS ELYQDIDVSA NAARIDAGTA SYTFSGWRRG YRNTSPFSND MDRSQIIVEY
LDVSGNVLET YDTGSAVFSV WTNNTDTRNA PIGTRTVRIR LISVRVSSSD NDGYYDDISF
IYNAPTCTAP AGITLTPAAA THYCLGSPLS ISAVVSPANT NYYYTWYLNG TAIAPASSTY
TPFTKPVTTA ADAGMYTLRV EDGNNSTAAC YQEASVTIIL DAAPVAGIIS SDQEICLGTA
ASALTGTAST GGTSVKYYTW QRSNTSASGP WVTVQAYSST AAGYTPASAT GTFYYRRIDS
SGACASVPTN AVTIRVNNTL KLDPITSLLR DTLCTGESFQ LIPHMAIPVP ASLNGGYYFT
WKKIQEPATS STAVAAGSSM THYPSVAMAA FLSDSGTYIL ITQDGMSAKK CKDSVQIKIH
INKAPDTKAL IQSNQEFCLS ASATPLTEVR PGSGVSGQLS YQWYTTKDTT GVPALIKIAS
ASSGISYDPG TPVQTNYYVR KDSVSYCPAV KTNFLKVRVN NKPILDSIHP LVNDTLCKNF
NEQFQLKGYL DSITAGKASL NGGYVFTWKK VQQTIGTTVL TSAGAYTDYP LTSRAVAEDD
SGTYYLIVRD GYGAATCFDS ISLHIVVQDN CVAINCSKPD AVSIKVAAGS SDQLCAGTTL
ILQKDVITFP AVPPTFGYVY SWVRTNTLGT VTVQGPSAMY QDLIVNAVTA ADSGRYELVV
QDGAASPASL CSERSQPITI VVYDPVTPAR IGSDTLICTG STILPFTELL ANSGGTGSYA
HQWQSSSDLS AFTDIAGATA ITYQPPAISS SIYFRRADRS GNCGVVYSDT VSVITTSGVI
PGSITSANGT ICYNTIPPQP LLSTGSAAGG TGGNGSELYQ WQQSADNINW TDIPGATAIN
YSETNPLQDT TYYRRRVIMG PGTCDQAYTT SVVLNVSAPF TPGTIGKDTA VCSGSSIRIK
ELTTATGNNI QYKWIASITK GASWFDAPGV STAKEYITPG LNDSIWYKRV AISSCSQDSS
NLVRVDVAVT PAAYAGTDTT VQKNSIIQLQ GRVIGSVNYV WIPSTRLSNA NILNPDAMIV
STITYTLKAT DVTGTCSAVS IVTITVEDPI GVPNVITPNG DGTNDTWIIE RIENYPNAIC
TIYNRWGNIV WKAGNGAFQW NGTNYRNGEA LPDGTYFYII DLKSTAYPEP YTGYIQLVR