Gene CHU_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1249 
Symbol 
ID4187039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1454713 
End bp1455810 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content42% 
IMG OID638071243 
Productesterase/lipase 
Protein accessionYP_677861 
Protein GI110637654 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0945507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCA TTTTAAGTTG CTCCGAACAT GCTGAAAAAA AGACAACTAC TGAAGTTATT 
CAGAAAGAAA CCAAAGACAG TATTGTTAAG GAAAACAAAA AGAAGGATCT GAAACCAGCA
GGTGAAGCAC CTGAATGGGG CAAGTCCATG ACACCGGAAA TGCTTGTTGT CATTGAAAAA
CTTAAAAGCC TCGGCGGAAA ACCAATCGAA ACGCTTGATG CAAAAGAAGC ACGCCAGCAA
CCTACTCCTG CAGACGCTGT ACTAGCTGTA ATGAAAGATT ATGACATGAC GATGCCTCCT
GCATTGTGTG ATACCGTAAA CAAGCAGATA CCTGTTACCG GAGGTACAAC AACCATTCGC
ATTTATACGC CTAAGCAAGG CACTGCTCCT TATCCGGTAA TTGTTTATTA CCATGGCGGC
GGTTTTGTAA TTGCTGATCT GGATGCATAC GGTGCAAGCG CACAAAGCTT ATGTGAACAG
TCTGGAGCCG TTGTTGTATC GGTAGAATAC CCAAAAGGTC CGGAACATAA ATTCCCTGCT
GCACATAATG TATGCTTTGA TGCCTATAAA TGGATCATCA AAAATGCTGC TTCTCTTAAT
GCAGATGCTT CAAAGATTGC ATTAGTGGGT GAAAGCGCAG GCGGCAATAT TGCTATTAAT
GTAAGCATCC TGGCACGTGA TAAAAAAATT CAGATGCCGC TGTATGAAGT ATTGATTTAC
CCGGTTGTAA ATAATGACCT GAATGCTGAA AGCTATGTTA CGTATGCGGC AGCAAAACCA
TTGAATAAAC CAATGATGGA ATGGTTTGTT AAAAATTACC TGAACACACC TAAGCAATCT
GAAGACCCGC GCATCAGTGT AGTACGTGCT AATCTGAACG GCTTGCCACC AACACTGATC
ATTGGTGCAG AAATTGATCC GTTGCAGTCT GAAGGAGAAT TGCTGAATAA GAAATTGAAA
GACGCAAAGG TTGATTCTCA ATATGAGTTA TACAAAGGTG TAACACATGA ATTCTTTGGT
ATGGCTGCAG TTATTCCGCA GGCTAAAGAT GCACAGGCAC TGGCTGTAAA AAAAATCAAA
GCTGCATTCG ACAAATAA
 
Protein sequence
MFSILSCSEH AEKKTTTEVI QKETKDSIVK ENKKKDLKPA GEAPEWGKSM TPEMLVVIEK 
LKSLGGKPIE TLDAKEARQQ PTPADAVLAV MKDYDMTMPP ALCDTVNKQI PVTGGTTTIR
IYTPKQGTAP YPVIVYYHGG GFVIADLDAY GASAQSLCEQ SGAVVVSVEY PKGPEHKFPA
AHNVCFDAYK WIIKNAASLN ADASKIALVG ESAGGNIAIN VSILARDKKI QMPLYEVLIY
PVVNNDLNAE SYVTYAAAKP LNKPMMEWFV KNYLNTPKQS EDPRISVVRA NLNGLPPTLI
IGAEIDPLQS EGELLNKKLK DAKVDSQYEL YKGVTHEFFG MAAVIPQAKD AQALAVKKIK
AAFDK