| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1240 |
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| Symbol | |
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| ID | 4187030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1443143 |
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| End bp | 1448389 |
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| Gene Length | 5247 bp |
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| Protein Length | 1748 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638071234 |
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| Product | bifunctional xylanase/esterase; CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein |
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| Protein accession | YP_677852 |
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| Protein GI | 110637645 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3405] Endoglucanase Y |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.267391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.341436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CTGTTTCTGT TTTTGTTGCC CTGTTTTGTT GTGCGTTTTT TTACGCAGTT
TCATCGAAGG CTCAGATTCC AGCTGCATAC CAGGTAGGTA CATGGAAAAA TTTTAAACCT
GCCGCGGTAA CGTACACATT TGATGATAAC ACCAGCAATC AGATTCCGGT TGCCATTCCA
TTATTAAATA CCTACGGTTT TAAATCGACC ATATTTGCTG TAACGCAGAG CATGAGCCCG
AACTGGGCAA ACATGAAAAC GGCAGCCAAT GCCGGACACG AGATCGGCAG TCATACTGTA
ACACATAATA ACTTAAATGG CGCGGCTATA TCTGCACAGG ATACAGAGCT GAAGAATTCG
CAGGCAACCA TTAACAGTAA TATCACTACG CAGAAATGTT ATACGGTAGC GTATCCGAAT
TGTAATATCG GAGATGTATC AACCATTCAG AAATATTACA TTGCGGGAAG AACATGCAGC
GGTCAGATCA TACCGAGTTC GCCGACTGAT TTTTATAATT TAAGTTCAAT CATATGCGGC
AATACAGGTG TAAACACCGC CAATGATATG AATACACGTG TCAACAGCGC AAAAACTTCA
GGCGGCTGGT GTGTGTTTTT AATACACGGC ATTGATGGCG ATGGCGGTTA TTCGCCGCTT
GCATCGAGCG TACTGAGCAG TCACCTTTCT TATGTGAATA CCAATACAGC CGATTATTGG
GTAGGCACAT TCGGTAACGT AGCTAAATAC ATTAAAGAAC GTAATGCCAT GTCTATTGCA
GAAACTACTG TAACAGCAGA TTCCCTGAGA ATGACGCCGA CAGATAATCT GGACAATACC
ATTTATGATG CGGCTATAAC TATCCGCCGT CAATTGCCTT CAGGCTGGAC TGCCGCGCGT
GTTATGCAGG CAGGTACAAT TATTACTTCG ACAATTGTTA CGGTTAATAC TGTTAAGTAT
GTACAGTTTG ATGTGGTTCC GGATAAAGGT GTGTATACAT TAGCGAATGC TGCTGTTACC
AATCCGGGCT GTGCAACTGC TGCACCAACG GTTTCGCCGG TGTCATTTGT GCAGGGAGCT
GCCGCAACGG CATTAACAGC TACCGGTACA GCATTAAAAT GGTACGGTAC AAATGCAACA
GCCGGCACGG CCAGTACAAC AGCACCAACA CCATCTACGA CTGCAGCCGG TTCAACAACC
TATTATGTTT CACAGACGCT AAACGGATGC GAAGGTCCGA GGGCAGCACT TGTAGTAACC
GTAACGGCTT CCGGTACAGG TAATACAAGC TGTAACGAAA CAGGGCAGGG AGCATATTAT
ACAGGCGTAT ACAGAAATAT GTTCAAAGAA TTGCTTAATA AGACAGATGC AGAAGTAAAA
GCAAAGGTTG ATGCTGCTTT TCAGCATTTC TTCTACGGCA GTTCCACTCA AAAACTATAT
TATGAAGTAG GTACTGATAT GGCTTATATA CAAGATATCG CTAACAATGA TGTGCGTTCA
GAAGGGATGT CTTATGGCCT TATGATCTGT GTGCAGCTTG ATAAAAAGGC AGAGTTTGAT
AAATTATGGA AATGGACGAA GACTTATATG CAGCATAATT CAGGTAACCT GGATGGATTT
TTCCGCTGGC AGTTAAATAC AAACGGAGGC GTTATTGATA ATAATCCTGC ACCAGATGGT
GAAGCTTATT TTATAACGGC ATTGTTTTTT GCTGCTAACA GATGGGGTAA TGGAACCGGT
ATTTACAATT ACAGTGCAGA AGCTCAAGCT GTATTAAGTA AAGTGCAGAG TAAGACAGGT
GCCGGAGGCA TAAACAGCTT ATTCAATACC AATTCCAAGC TGATTACTTT TGGACCGAAT
GGCGGATCGT ATGATTTTAC AGATCCTTCC TACAATCTGC CAGGGTTTTT TGAACTTTGG
GGAAGATGGT CCACTTCAAA TACTGCGTTC TGGCAACAGA CACCTGCAGC GGCAAGAAAG
CTGATCCGCG ACGCTTCACA TTCTACTTCG GGCCTTACAG CAGATTATTC TAACTTTGAC
GGTACGCCTA AAACAACATC ATTCAACAGC GACAGTCACC GGTTTATGTA CGATGCGTGG
CGCACCATTA TGAACCTGGG TATGGATTAT CACTGGTTTA AGGTAGATGC CCAGCAGCCT
GTTATCGCAG AGAGGTATCT GAACTTTTTT AAAAATCAAG GTTCGAATTA TAAAAATCAT
TACGACTGGA ACGGATCAAA TGCCGGCGGA GATCATTCAA CGGGCCTTGT AGCCTGTAAT
GCCGTAGCGT CTTTAGCTGT TACAAATACA ACACTTACTA CTCCGTTTGT ACAGGAATTC
TGGAGTACAG GCCTTCCTAC CGGTACGTAT AGATATTACG ATGGTATGTT ATACCTGCTT
GGTATGTTAA ACTGCTCCGG TAATTTCAAA GTATGGAAGC CTGAATGTCC GAATACCTGT
GCGACACCTG CACCAACTGT TGCCGCAGCT GTTATTAATT ACGACCTGAA TGCTGCAGCT
ACAGCATTAA CGGCAACGGG TACTGCTGTT AAATGGTATA CGGTGGCAAC AGGCGGTACT
GCTTTAACAA CAGCACCAAC ACCTTCCACT TCGGTTACCG GAACAATGGT ATATTATGCC
GCACAGACAT TAAATGGCTG TGAAGGCCCA CGTGTTTCTG TAACAGTTAA CGTAGTAAAC
AATTATAAAA TATATAAAGT AAGTGCTCCG GTAGCGGTAG ACGGTACGGT AGACGAAGTA
TGGAACAATG TAAATGTGCT GCCTGCTGCC GCAACTAAAT TGTTGTCAGG TACCGTTACA
AACAGCGCAG ACTTATCGGG TAATTTTAAA GCACTATGGG ATGATACTTA CCTGTATATA
CTTGCTGATA TTACGGATGA TGTAAAAATA AGCGAAAGTA CAAATGCTTA CGATGATGAC
GGCGTAGAAG TTTATATTGA TATTAATAAT GATAAAGCAA CAACTTATAG CACAAATGAT
TTTCAATATA CATTTGGCTG GAATAAAGGA ACAACGGTGA GTGTATTGCC TGCAGGCCGC
TCTGTGGCTG GCATTACCTA TACCGCGGTT GCACGTACCG GTGGTTATAT TATAGAGGCC
CGTATTCCAT GGGCAACGAT ACAGGGCACG CCTGCTGCCG GCCAGCTTGT GGGTATAGAC
TTTATGATCA ATGATGATGA TGATAACGGT GTACGGGATG GAAAGCTTTC CTGGAATGCT
GCTACAGATA ATGCATGGCA GGATCCTTCC TTATTCGGTA CGGCAATTTT ACAAGGCGCG
GTACCGTGTA CAACACCAGC GGCACCAACA GTTACCGCAA CAGCGGCGTA TTGCCAGAAT
GCACCTGCTA CTGCATTGAC GGCAACCGGT ACCGGATTGA AATGGTATAC AGCAGCAACA
GGTGGTACAT CTGCAGCTTC ATTGACGCCG GAAACAGGAA CTGTTGGCAC AATAAATTAT
TATGTATCGC AAACAGTGAG CGGCTGTGAA AGTTCAAGAG CAGCGATTGC GGTAACGGTA
AATGCCTTGC CGGCAGCAGT AATTACAACA GCAGGTGCAA CCACATTCTG TGCAGGCGGT
TCGGTAACAC TTACATCAAG CACAGGTACT TCCTACGTAT GGAAAAGAGG TACAACACAG
GTAGGCACAA CTGCAACCTA TGCAGCAACG GAATCCGGTT CTTATACGGT AGAAGTTACG
AATGCAAATA CATGCAAAGC AACATCAGCC GCAACAACCG TAACGGTAAA TGCAGCACCA
GCGGCACCAA CAGTGAGTGC AACCGCAGCG TATTGCCAGA ATGCAGCAGC AGCTGCATTA
ACGGCAACCG GTACGGGATT GAAATGGTAT ACAGCATCAA CGGGCGGCAC AGCTGCTGCA
ACGCTGATAC CGGAAACAGC AACCGTTGGT TTAACCAATT ATTATGTATC GCAAACTGTA
AGCGGATGTG AAAGTCCGAG AGCAGTGATT GCGGTAACGA TAAATGCTTT ACCGGCAGCA
ACAATCACAG CAGGTTCTGA AACGACATTC TGCGCAGGCG GTTCTGTTAC ACTTACAGCC
AGTACAGGTA CTTCTTATGT ATGGAAGAAT GGAAACACAC CGGCAGGTAC AGCTGCAACG
TATGTAGCAG CTTCAGCCGG CTCTTATACG GTAGAGGTAA CAAATACGAA CAATTGTAAG
GCTGTTTCAG CAGCTACCGT TGTGGCGATA AATTCCTTAC CGTCCGCTCC GGCGGTAACG
GCAACTGCAG CGTATTGTCA GCAGGCAACG GCTATTCCGT TGACAGCAAC CGGAACTGCT
TTGAAATGGT ACGAAACAGC CAGCGGCGGA ACTGCCCTGG CAAACACACC TATACCTTCA
ACAGCTGCAA CAGGTAATAC CAGCTATTAT GTATCGCAGA CAACAAACGG CTGTGAAAGT
CCGCGCGCAA TGATCACGGT AACAGTCAAT GAATTGCCGG CAGCAACGAT TACACCAACA
GGTTCTACTG CTATTTTATC GGGAGGCAGT GTATTGTTAA ATGCAAACAC AGGTTCTGGC
TTATCATATA AATGGTTTAG AGGAACAACT CCATTAAGCA CGGCATCATC GTATGCCGCT
ACTTCAGCAG GCGATTATAC CGTAGAGGTT ACAAATGCGA ATAACTGTAA AATGGTTTCT
GCAGTAACTA CTGTAACGGT AACAACCAAT CAGCCTTCGG TTATTACGAT CACATCGCCG
GCAAACAACA CAAATGTATC TTCTCCGGTT TTGATTACGG TAGATGTCTC TGATCCGGAT
GGTTCTATTG AACAGGTTGA ATTCCTGGAT GGTGATATCG TAATCGGAAC AGCTGCATCA
GAGCCATACA GCTTTACATG GAATGATCCG GGAACAGGAT CACATACCAT TACGGTGCGT
GTTAAGGACA GCAACGGCGG TATTACTACT TCTTCTCCGG TGATCATCTT TACAGGAATT
ACAACAGGGA TTTCATCCGG TAACAGCATG TACAGCAATG TATATCCTGT TCCGGCAAGA
GATGAAGTAA TTGTTGAAAC GGATCTGGAT CTTTCAGGAG CAACGGTTAA AGTTGTAAGT
ATTTTGGGTG AAGAAGTTTC TTTGCCGGTT GCTATCAATG GAACAGATGC AAAACTGAAT
GTAGCAGAAC TGTCAGACGG AACATACATT CTGATTATCA ATCAGCAGTC AAATGTTATC
ACAAAGAAAA TCAGTATTAT AAAATAA
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| Protein sequence | MKKSVSVFVA LFCCAFFYAV SSKAQIPAAY QVGTWKNFKP AAVTYTFDDN TSNQIPVAIP
LLNTYGFKST IFAVTQSMSP NWANMKTAAN AGHEIGSHTV THNNLNGAAI SAQDTELKNS
QATINSNITT QKCYTVAYPN CNIGDVSTIQ KYYIAGRTCS GQIIPSSPTD FYNLSSIICG
NTGVNTANDM NTRVNSAKTS GGWCVFLIHG IDGDGGYSPL ASSVLSSHLS YVNTNTADYW
VGTFGNVAKY IKERNAMSIA ETTVTADSLR MTPTDNLDNT IYDAAITIRR QLPSGWTAAR
VMQAGTIITS TIVTVNTVKY VQFDVVPDKG VYTLANAAVT NPGCATAAPT VSPVSFVQGA
AATALTATGT ALKWYGTNAT AGTASTTAPT PSTTAAGSTT YYVSQTLNGC EGPRAALVVT
VTASGTGNTS CNETGQGAYY TGVYRNMFKE LLNKTDAEVK AKVDAAFQHF FYGSSTQKLY
YEVGTDMAYI QDIANNDVRS EGMSYGLMIC VQLDKKAEFD KLWKWTKTYM QHNSGNLDGF
FRWQLNTNGG VIDNNPAPDG EAYFITALFF AANRWGNGTG IYNYSAEAQA VLSKVQSKTG
AGGINSLFNT NSKLITFGPN GGSYDFTDPS YNLPGFFELW GRWSTSNTAF WQQTPAAARK
LIRDASHSTS GLTADYSNFD GTPKTTSFNS DSHRFMYDAW RTIMNLGMDY HWFKVDAQQP
VIAERYLNFF KNQGSNYKNH YDWNGSNAGG DHSTGLVACN AVASLAVTNT TLTTPFVQEF
WSTGLPTGTY RYYDGMLYLL GMLNCSGNFK VWKPECPNTC ATPAPTVAAA VINYDLNAAA
TALTATGTAV KWYTVATGGT ALTTAPTPST SVTGTMVYYA AQTLNGCEGP RVSVTVNVVN
NYKIYKVSAP VAVDGTVDEV WNNVNVLPAA ATKLLSGTVT NSADLSGNFK ALWDDTYLYI
LADITDDVKI SESTNAYDDD GVEVYIDINN DKATTYSTND FQYTFGWNKG TTVSVLPAGR
SVAGITYTAV ARTGGYIIEA RIPWATIQGT PAAGQLVGID FMINDDDDNG VRDGKLSWNA
ATDNAWQDPS LFGTAILQGA VPCTTPAAPT VTATAAYCQN APATALTATG TGLKWYTAAT
GGTSAASLTP ETGTVGTINY YVSQTVSGCE SSRAAIAVTV NALPAAVITT AGATTFCAGG
SVTLTSSTGT SYVWKRGTTQ VGTTATYAAT ESGSYTVEVT NANTCKATSA ATTVTVNAAP
AAPTVSATAA YCQNAAAAAL TATGTGLKWY TASTGGTAAA TLIPETATVG LTNYYVSQTV
SGCESPRAVI AVTINALPAA TITAGSETTF CAGGSVTLTA STGTSYVWKN GNTPAGTAAT
YVAASAGSYT VEVTNTNNCK AVSAATVVAI NSLPSAPAVT ATAAYCQQAT AIPLTATGTA
LKWYETASGG TALANTPIPS TAATGNTSYY VSQTTNGCES PRAMITVTVN ELPAATITPT
GSTAILSGGS VLLNANTGSG LSYKWFRGTT PLSTASSYAA TSAGDYTVEV TNANNCKMVS
AVTTVTVTTN QPSVITITSP ANNTNVSSPV LITVDVSDPD GSIEQVEFLD GDIVIGTAAS
EPYSFTWNDP GTGSHTITVR VKDSNGGITT SSPVIIFTGI TTGISSGNSM YSNVYPVPAR
DEVIVETDLD LSGATVKVVS ILGEEVSLPV AINGTDAKLN VAELSDGTYI LIINQQSNVI
TKKISIIK
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