| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1228 |
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| Symbol | icd |
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| ID | 4184676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1417496 |
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| End bp | 1418728 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071223 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_677841 |
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| Protein GI | 110637634 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.661186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAA AAATTAAAGT AGCTAACCCG GTTGTTGAAC TGGATGGCGA TGAAATGACA
CGAATTATCT GGAAATTTAT TAAAGATAAA TTGATCCTTC CTTACCTGGA TTTAGATATC
AAGTATTATG ACTTGGGTAT GGAAAACCGC GATGCTACAA ACGATCAGGT TACAATTGAT
TCTGCAGAAG CAATTAAAAA ATACAGCGTT GGTATCAAGT GTGCTACTAT TACACCGGAT
GAACAACGTG TTGAAGAATT TAAACTTAAA CAAATGTGGA AGTCTCCAAA CGGTACCATC
CGTAACATCT TAGATGGTAC TGTTTTCCGT GAGCCGATCG TTTGTACAAA CGTACCACGC
TTAGTTCCTA ACTGGACTGC TCCTATTGTT GTTGGCCGTC ACGCATTTGG TGATCAGTAC
AAAGCAACGG ATTTCGTTGT ACCGGGCAAA GGTAAATTAA CCATCAAATT TGAAGGTGAA
GACGGAAAAG TAATTGAGCA CGAAGTGTAT CAGTTCAAAG GTCCGGGTGT TGCAATGGGC
ATGTACAATA CAGAAGAGTC AATCAGAGGT TTTGCGTATT CTTGTTTCAA CATGGCCTTA
AGCAAAAAAT GGCCCTTATA CTTATCTACT AAAAACACCA TTTTAAAGAA ATACGATGGT
CGCTTCAAAG ATATTTTTGA AGAGATCTAC CAGAAAGATT ACAAATCCAA GTTTGAAGCT
GCGGGTATTG TTTACGAACA CCGTTTGATT GATGACATGG TTGCTTCTGC ATTAAAGTGG
AACGGTAACT TTGTCTGGGC TTGTAAAAAC TATGACGGAG ACGTTCAATC AGATACGGTT
GCTCAAGGTT TCGGTTCATT AGGTTTAATG ACATCAGTAT TGGTTACGCC AGACGGTTCT
ACAATGGAAG CAGAAGCGGC ACACGGTACA GTAACGCGTC ACTACAGAGA TCACCAGGCA
GGTAAACCAA CGTCTACAAA CCCGATCGCG TCTATCTTCG CATGGACAAG AGGTTTGGAA
TTCCGCGGTA AAAAAGATGG TAACCAGGAA TTGGTTAACT TCTGCCAGAC ACTTGAAAAA
GTTTGCGTTG CAACCGTTGA AAGTGGTAAA ATGACAAAAG ATTTAGCTGT TTGTATCCAT
GGCAACAAAG TGAAACATGG CGAACACTAT TTATATACAG AAGAATTTTT AGCTGCAATT
GATGACAATT TGAAAATTGC ATTAAAGAAG TAA
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| Protein sequence | MSGKIKVANP VVELDGDEMT RIIWKFIKDK LILPYLDLDI KYYDLGMENR DATNDQVTID
SAEAIKKYSV GIKCATITPD EQRVEEFKLK QMWKSPNGTI RNILDGTVFR EPIVCTNVPR
LVPNWTAPIV VGRHAFGDQY KATDFVVPGK GKLTIKFEGE DGKVIEHEVY QFKGPGVAMG
MYNTEESIRG FAYSCFNMAL SKKWPLYLST KNTILKKYDG RFKDIFEEIY QKDYKSKFEA
AGIVYEHRLI DDMVASALKW NGNFVWACKN YDGDVQSDTV AQGFGSLGLM TSVLVTPDGS
TMEAEAAHGT VTRHYRDHQA GKPTSTNPIA SIFAWTRGLE FRGKKDGNQE LVNFCQTLEK
VCVATVESGK MTKDLAVCIH GNKVKHGEHY LYTEEFLAAI DDNLKIALKK
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