Gene CHU_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1226 
Symbol 
ID4184674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1415608 
End bp1416399 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content39% 
IMG OID638071221 
Productmethyltransferase 
Protein accessionYP_677839 
Protein GI110637632 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.581688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG ATAAGGAAAT TATCAAACGT GCTGTTGAAC GTCACGATAT CGACAGCAGT 
ATTTTTCAGG GCAGGTATGT AAACTTTACA CAGGGTAAAT ATACGGATGA GTTTATTTAC
GGGCGTTACC AGATGTTTGA AGAGATTGAC AGAATCCTTT CCAGCTTGCC CAAAGGGGCT
AAAGTCCTTG ACCTGGGTTG CGGAACAGGG CATTTCTCCA CATACATCAA AACACTCTGC
TATGAAGTAA CAGGTCTTGA CCCGTCTACA AAAATGCTGG ATTACGCACG TCAGAATTTT
CCCGAAATCA CCTTTGTTGA AGGTTATTCC AATGCACTTC CGTTTGAAGA CAATACCTTC
GACCTGATCA TCAGCATTGA AGTATTACGT TACCTCGATA CTAAAATTGT ACTGGAATCA
TACGAAGAAA TATACCGGAC ATTAAAACCA AACGGTAAAA TGTTTATCAC CCATGTAAAC
ACGCTTGCAA CAGAAGGATA TTACATATTT TACCATTTAA AAAAACTGGC ACATTCCTTT
AAAGGAAAAG AATACCACAG TGCTTATTTT ACCTCTGCCA ATAAAGAAGA ACGCACACTG
AAAAAAATAG GCTTTAAAAA CATTTCCTGC ATTGGACGTA TGTTCGCGAC AGTGCGTACC
GGTTATAAGT TCGGAAAGAC AATTGGAAAA ACATACGCAA AGCTGTTGGA AAAATTCAAT
CCGAAACAGC GTTTTGAAAA AAGTCATTTC AAAAACTTCA CCGGCCATCT GATTGTCATT
GCAGAGAAAT AG
 
Protein sequence
MSNDKEIIKR AVERHDIDSS IFQGRYVNFT QGKYTDEFIY GRYQMFEEID RILSSLPKGA 
KVLDLGCGTG HFSTYIKTLC YEVTGLDPST KMLDYARQNF PEITFVEGYS NALPFEDNTF
DLIISIEVLR YLDTKIVLES YEEIYRTLKP NGKMFITHVN TLATEGYYIF YHLKKLAHSF
KGKEYHSAYF TSANKEERTL KKIGFKNISC IGRMFATVRT GYKFGKTIGK TYAKLLEKFN
PKQRFEKSHF KNFTGHLIVI AEK