| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1221 |
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| Symbol | |
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| ID | 4184669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1400059 |
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| End bp | 1405032 |
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| Gene Length | 4974 bp |
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| Protein Length | 1657 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638071216 |
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| Product | glucose/sorbosone dehydrogenase-related |
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| Protein accession | YP_677834 |
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| Protein GI | 110637627 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.141757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACG TATTTACAGT TTTCAGCTTC TTTCTTTCTG TTCTTGCATT TGCAGGCAAT
GGAAATAACT ATCAGGCCCC GCGTGCCCAA ACAGCTCCTA CCATTGATGG TAATGGCAAT
GATGCCTGCT GGAGTTCAGC AACCTGGTAT GATGTAAGTT ATCTTTGGTT GGGCGTGCAG
CCTTCGGCGG CAGATTTTAC GGGTAAATTT AAAGTAACCT GGAACGCAAA TAAATTATTC
ATATTGGCGG AGATCACAGA TGATGTACTA AATGATAACT ATGCAAACCC GCTTTCAAAT
TACTGGGAAG ATGATACCTG GGAAATATTT CTGGATGAAA ATCATTCAGG CGGAGAACAC
GAAAATAATT ACAATGCATT TGCCTACCAC GTATCTACGT TAGGTGATAT TGTTGATTCA
GATCTTGGCT CACCACGATT ATTCAATGCA CACGCGACAG TATCCAGAAC AAAGAGCGGA
ACAACCTATA CCTGGGAAGC TGCTTTTGAT GTATATACAG ATGCCTATAT ATATGCGAAC
GGAACATCAA ACCCAAAAGC TACCTTAACG TTAGGAAAGC AAATGGGCTT TGCCATGGCC
TATTGTGATA ATGATGGCGG TACTACCAGA CAAAGTTTTA TCGGTTCAGA AGATGTTCCG
GGAACAAATA AAAATGTTGC CTATCAAAAT GCAACTGTAT TTGGCAACTT AGAATTAGTT
GAAACATTAA CACCTACGTT CAGCCAGATT TTAGTTAATA ATACAGGTCT TACCAACCCT
ACCGTTATGA CGATGCTTCC GGATGGACGT ATCCTGATCG GCCAGCAGGC GGGTACAGTA
AAGATTGTTA AGAACGGAGC CTTACTTTCG GGAAATGCTT TAGCCATCAC CGTTGATGCA
TCCGGCGGTG ATTATACTGA ACGCGGTTTG ATAGGTATTA CCTCAGACCC GAATTTTGCG
GCAAACGGGT ATATCTATAT TTTTTATACC ACGAGTGTTG GCGGCACGCA CAATAAAGTA
AGCCGGTTTA AAATGACTGG AGATGTCATT GACCCTGCTT CCGAAACACT TGTTACAGAC
CTCGATCCGT TATCAACAGC ATCCAATCAC AACGGCGGCG CCCTGCATTT TGGCCTTGAT
GGCAAGCTCT ATATCGCAAC CGGTGAAAAT GCAACACCTG CCAATGCGCA GAATTTAACT
GTTACGCATG GAAAACTACT GCGTTTGAAT GCCGATGGAA CGATCCCTTC TGACAACCCA
TATGCTACAG ATGCAAATCT TTCAAAAAGA AAAATCTGGC AATACGGCTT ACGTAACCCA
TTTACGTTTG ATATACAACC GGAAACGGGA AAACTATTCA TCAATGATGT TGGCCAGGAT
GCCTGGGAAG AAATCAACGA TGGTACGGTA GCCAATAAAA ACTTTGGCTG GCCGAATGTG
GAAGGAGTAA CAACGATTAC TACTTACGCA AACCCTGTAT ATACATACAA TCACGGCGCG
AGCAATGTGA ATGGCTGTGC CATCACTGGG GGGTGCTTCT TTAATCCTGC ATCTACAAAC
TACCCATCTA AATATATTGG TAAATATTTC TTTATGGATT ATTGCGGTGA ATGGATGGAT
GTTATGGACC CTGTAACGGG ATTAAAAACA GAACGTTTCA TTGACAACGT AATCGGCAGT
TACCCGGTAG CGGTTGACGT TGCTGCAGAT GGTAACCTGT ATTATTTAAC AAGAAGCCCT
GCGGCATTAT ATAAAGTCGT TTATTCAGGA AGTTCCATTC CCGACATTCT TCAGAATCCT
GCATCGCAAA CGGTAGCAGC CAGCCAGCCG GCAACCTTTA AAGTAAGTGC AGCAGGTGTT
AAACCGTTTA CATACAGGTG GCAAAAAAAT GGCGTAGATA TTCCCGGCGC TGTAGATTCA
ACTTTTAAAA TCGCTGCTGT AGCAGCAGGC GATGCGGGTG CTTACCGTGT CATCATAACC
AACACGTATG GTTCCGATAC CAGCAGTGCT GCAACATTAA CGGTTACAGC GTTTAACAGC
AAGCCTACCG TTACGTTCAC AACTGCACCG GCAAACAACT CCTTATTTGT TGGCGGACAG
GTATTCAATT TTGTAGCAAC GGCAACCGAT GTACAGGATG GTTTATTGCC TGCAAGTGCC
TTCTCCTGGC ACTTTGATTT ACACCACAAC ACACACATTC ACGATGGCTT ACCATCAAAC
GGTGTTAAAA ACTTCACGGC TACCATTCCT ACAACCGGCC ATACAGACAC CGACATCTAT
TATAAAATAT ATGTAGTTGT AAAAGATGCA GGCGGATTAA CCGATACAGC TTTTGTAAAC
TTATTGCCAA CGCTGAAAAA GATTACCCTA AAAACAGTTC CGGCAGGTTT AACCGTAAAA
CTGGATGATG AGCCGGTGGT AACACCAAAC ACACAGCAAA GCGTTGTTGG TGTAGTACGT
ACCTTAGACG TGGTGCTTAC ACAATCCTAT CAGGGAAAAG TATACAGCTT TACAGGCTGG
TCTCACGGCG GCACGGCAAA TCAGTCTTAT GCTACTGCCG GTAAAGACAC AAGCTTTACA
GCCTTATTCC AGGAGACACA GGTAATAAAA GACAGCATCT CTCCTATTCA TGATGCCTTT
GCACAATACA CCAGCTATGA TGGTACCAAT GCCAACATTG CTTATGGTGC ATCTACACCA
AATGATCTGG TGGTGAAAAA CTATTCTGCA ACACCGAACA GACAATCGTA TCTCATGTTT
AACCTGAACA ATCTGTTAGG AAGCGCTACG GATATTTCTT CTGTCAAATT AAAATTATAC
GGAGGTCTTT CAAATGAAGT AGGCGCAAAC AGCATTAAAG TAATTGCGTA TGAAGGGGCA
AGCAATTTAT GGACAGAAAA TGCGGTTACC TGGAATACAA AACCGGAACG GTTAAATGTA
AAATATGATT CTGTAACGGT AACAAACTTA AGTCCTGCGG ATCAGTTTTT TTATTTAGAC
CTTACAGCAC TTATCAAAGC TAAAGTTGCT GCCGGCCAGA ATTTAGTTAC AGTAGTATTA
GTAACACCAA ACGACAATGC GAAGCGTGTT ATCTTCCAGT CAAAAGAAAA CCCGGCAGCG
AAAGGTCCTA TGCTGGTAGT TTCTTACGCA GCAAATTGCA ACGCTGCCAT TACATCTCCG
GGTACCGTAT ATTGCACAGG TTCTTCATTG ACCTTATCTG CCAATTCAGG TTCAGGCTTT
ACCTACAAAT GGTATAAAGA TGCTGTACTT ATTCCAGGTG CAACTGCTGC AACATATCCT
GTAGCTACAA ATGGTGCATA TACCGTACAG GTAACAAATG CATCCGGATG CTTTAAAACA
TCCAGTGCCG TATTAATTAC ACAGGCTACC CCTCCAACCA TAACAATTAC GTCTCCTAAA
ACAGCCCTGT GTACCGGTGA TTCTATTTTA ATTACCGCGA ATCCGGCAAC AGGCTTAACC
TATGCATGGT ATAACAATAA TACGCTTATA GCCGGAGCTA CCTCTAACAG CTATAAAGCA
AAAGCAGCAG GTGTGTATAC GGTTGAAGCG CAAAATACAA GTGCATGTAA AAAGGTTTCT
ACACCGATAA CAATTACTGA AAATGCCTTA CCAACAGCTG TCATTACCAA TTCGGCATCT
GCGCTATGTA CAGGAGATTC AATCACGTTA ACGGCTACGG CAGGAAATGC CAGTTACCAG
TGGTATAAAA ATGCTGCCGC AGTAAGCGGT GCAACACAGA GTACATACAA AGTAAAAACA
GCTGGCTCCT ATACGGTTGA AGTAAACAAT GCAGCTGCAT GTAAAAAACT ATCGGCTGCC
GTTTCCATTA CAGAAAACGC ATTACCGGTT ATAAGTGTTG CGGCCCCGGT ATTTGGTATT
TGTACAGGAG ATTCTACTAC ATTAACTGCA ACTCCTGCAA CCGGGTTAAC ATATAAGTGG
TTCAAAAATT CCGCATTGAT TTCAGGTGCT TCGGCAAATA TGTACAAAGT TAAAACAGGC
GGCAGTTATT ATGTTGAAGC AACCAATACA AACGGCTGTA AAAAGAATGC AACAGCAGTA
ACAATAACAG AAAATCCGTT ACCAACCGTT ACCGTTACCT CAACGGCTAC TTCTTTCTGT
ACAAACGGTA CCGTTACGTT AACGTCCAGC AATGGCCAAA CCTATAAATG GATGCTTGCC
AATACACCTA TCGCCAATGC GACAGCTTCA ACATTGGTTA CCGGTACGGC AGGTTCTTAT
ACGGTTGAAA TCAGCAGCGC AAACGGCTGT AAGAAAACAT CTGCACCTGT GGTATTGACA
GAAAACAGCT TACCGGTTGC TGAAGTAACG GTTCCTTCCA CATCATTCTG TTCAGGCAGC
ACACTTGAGC TTACCTCCAG CACAGGTGCT TCCTACCAGT GGTATAACAG CAATGGTATT
ATTGCCGGTG CAACAACTGC TACCTATCTT GCCAGCACAG GAGGGCCGTA TTATGTAGAA
GTAACCAGCA GTCAGAATTG CAAAAAAACA TCTGAACCGA AGAGCCTCAC GGTTGTTAAT
TCGGTTACCT GGTATGCAGA TACTGACGGA GACGGTATGG GAGTTGCAGG TGAAACAATT
TCTTCGTGTA CACAACCCAA TGGGTATGTA TCTGTAGCCG GAGATCTTTG TCCGGCAGAT
GCAAACAAAA CCGAACCAGG TACCTGTGGC TGCGGTATTG CAGAAGGTAC GTGTATACCA
ACGGATGTAA CAGGTGTATT AAGCCAACAG GCATTTGTTC TGTTTCCGAA CCCGGTTACA
CAAACAATCT TATACTTCTC TAAAGAGATA AGCGGCACCG TATATGATGC CAAAGGCGCC
CTGGTACTGT CATTCAGTGA TGCTGAACGC ATTGAAACCA GCACATTGGA AAACGGTCTG
TATATCATCC ATACAGCAAC CGGCGACAAC TATAAATTTT ATATCGCGCG GTAA
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| Protein sequence | MKHVFTVFSF FLSVLAFAGN GNNYQAPRAQ TAPTIDGNGN DACWSSATWY DVSYLWLGVQ
PSAADFTGKF KVTWNANKLF ILAEITDDVL NDNYANPLSN YWEDDTWEIF LDENHSGGEH
ENNYNAFAYH VSTLGDIVDS DLGSPRLFNA HATVSRTKSG TTYTWEAAFD VYTDAYIYAN
GTSNPKATLT LGKQMGFAMA YCDNDGGTTR QSFIGSEDVP GTNKNVAYQN ATVFGNLELV
ETLTPTFSQI LVNNTGLTNP TVMTMLPDGR ILIGQQAGTV KIVKNGALLS GNALAITVDA
SGGDYTERGL IGITSDPNFA ANGYIYIFYT TSVGGTHNKV SRFKMTGDVI DPASETLVTD
LDPLSTASNH NGGALHFGLD GKLYIATGEN ATPANAQNLT VTHGKLLRLN ADGTIPSDNP
YATDANLSKR KIWQYGLRNP FTFDIQPETG KLFINDVGQD AWEEINDGTV ANKNFGWPNV
EGVTTITTYA NPVYTYNHGA SNVNGCAITG GCFFNPASTN YPSKYIGKYF FMDYCGEWMD
VMDPVTGLKT ERFIDNVIGS YPVAVDVAAD GNLYYLTRSP AALYKVVYSG SSIPDILQNP
ASQTVAASQP ATFKVSAAGV KPFTYRWQKN GVDIPGAVDS TFKIAAVAAG DAGAYRVIIT
NTYGSDTSSA ATLTVTAFNS KPTVTFTTAP ANNSLFVGGQ VFNFVATATD VQDGLLPASA
FSWHFDLHHN THIHDGLPSN GVKNFTATIP TTGHTDTDIY YKIYVVVKDA GGLTDTAFVN
LLPTLKKITL KTVPAGLTVK LDDEPVVTPN TQQSVVGVVR TLDVVLTQSY QGKVYSFTGW
SHGGTANQSY ATAGKDTSFT ALFQETQVIK DSISPIHDAF AQYTSYDGTN ANIAYGASTP
NDLVVKNYSA TPNRQSYLMF NLNNLLGSAT DISSVKLKLY GGLSNEVGAN SIKVIAYEGA
SNLWTENAVT WNTKPERLNV KYDSVTVTNL SPADQFFYLD LTALIKAKVA AGQNLVTVVL
VTPNDNAKRV IFQSKENPAA KGPMLVVSYA ANCNAAITSP GTVYCTGSSL TLSANSGSGF
TYKWYKDAVL IPGATAATYP VATNGAYTVQ VTNASGCFKT SSAVLITQAT PPTITITSPK
TALCTGDSIL ITANPATGLT YAWYNNNTLI AGATSNSYKA KAAGVYTVEA QNTSACKKVS
TPITITENAL PTAVITNSAS ALCTGDSITL TATAGNASYQ WYKNAAAVSG ATQSTYKVKT
AGSYTVEVNN AAACKKLSAA VSITENALPV ISVAAPVFGI CTGDSTTLTA TPATGLTYKW
FKNSALISGA SANMYKVKTG GSYYVEATNT NGCKKNATAV TITENPLPTV TVTSTATSFC
TNGTVTLTSS NGQTYKWMLA NTPIANATAS TLVTGTAGSY TVEISSANGC KKTSAPVVLT
ENSLPVAEVT VPSTSFCSGS TLELTSSTGA SYQWYNSNGI IAGATTATYL ASTGGPYYVE
VTSSQNCKKT SEPKSLTVVN SVTWYADTDG DGMGVAGETI SSCTQPNGYV SVAGDLCPAD
ANKTEPGTCG CGIAEGTCIP TDVTGVLSQQ AFVLFPNPVT QTILYFSKEI SGTVYDAKGA
LVLSFSDAER IETSTLENGL YIIHTATGDN YKFYIAR
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