| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1214 |
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| Symbol | |
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| ID | 4184662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1390440 |
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| End bp | 1394537 |
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| Gene Length | 4098 bp |
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| Protein Length | 1365 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071209 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_677827 |
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| Protein GI | 110637620 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTT CCGGCAAAGC AGGTTCACTG GTGCTGGCCC GTGCATACTT TTTATATGCA
AAAGGTTCGG AGCTGGATGG TAATTTTAAA GCGTATGAAG AATACATGTT TAAAGGCGAC
CGCGAACTGC AGAAGTCTTC AAAGGATGAT GTATACCAGT ATGCAAAGTC TGTGAATTAT
GCCATTGATA CTTATTTGTC TTACGGAGAT TATGTAAACG CGTCAAAATA TTTAGGGGAT
ATCTATGGTA TCATTGCTAA AGGCGGGTTG AGCGATTCGG GTTTATATTA TGATTTGAAA
AAAAGTTCGG TGATCACTTT TTATCGCCAG GGTTTTTATA TCAAAGCACA AAAAGGTTTA
ACGGAAATTA TTGCGTTCAG AAAAAGAAAC ATTGTAACAA GTGAATTAAA AACTGATCCG
AAAACCGGTA AACAAAAAGT AGTTAAAGTT TCCGGTATGG ACCTGATCCT GCGTAAACGT
GCGTATGCGC GTATGCTGAA CATGCAGGCA GAGATGTATC TGGATAACGG CAATTATAAA
TCTACCGATT CGATCCTGAA CCTGACCAGC GAATGGATAA AGAAAAATGT TGGAACGAAA
GATCTGTGTT ATGTCGAAAA TCTCTTTTAT AAAGGACGGC TGGCAGAAAC AGTAGGTACA
AAAAAAGAAG CAAACCGGTT ATACGACCTG GCGTATAACA CACTGTTAAA AACAAAGTAC
GGCAGATACA GGAATTACAG CCGGGAAGCC ATTATGATTT TTGAATACCT GATCCCGACA
TACCGTGTAA CCAGCCAGAG CAGCGATTTC AGAACCAAGT CTGAAATGTT TGACGTACGT
GTTACACGCT ATTATGGAAA AGATAATTAC TACTACAGCA AAGTCATTTT CCTGGAAATT
CAGGATCGGT TTTTATCAGA GGACTGGAAC GGCGCAGTAA AAAATATTGA TAAGATTTTA
AACAAAGAAG GCATGATTCC GAAGGTTCAC CTGGATCGTG CGTTCCTGCT GAAAATATTA
GCCGATGCGT ATATTGAATT AGATCGTTAC GATGAAGCAG AAGCAGCCAT TGAACAGGCT
ACTCAGATTA AATTAGCCCT GCTGGGTGAA GCATCTCCGA ATTATCACAT GCAGCTGCTG
GACCGTGCCA CGTATTATGT AACGTATACG GATAAATTTA AAAAAGCAGA AGAGACATAT
AAATATAGCT TGAATCAGGT GGTAAGTAAA GAACTTGATC ATCAGCACAA ACAATATGTA
ACCTACCTGT ATCAGGAAGC AAAGCTTTTT GAATTGACAG ACCGTTTTGA TGAAGCACAG
AAAATTGCCG CTGAAGCTAC TGCTATTGTT GTGGCACGAT ATGGCAAGTT GAGTGTGAAC
TATGGAACTG CTTTGCAGAC ACAGGCAAAC CTGGATATCT CTCAGGGGAA TTACGGCGAC
GCAGAATTGA AACTGGCAGA AGCATTGGCA TTGTTCAAAA AATTTGCAAC CGATAAAGAT
AATTTAGAAT ACGCAAAAGT GCTGGAAACG CAGGCGCGTT TATTTATTAT CGAAGGCTTG
TATGAAGATG CGGAGAAAAA CCTGAAGAAG GCATATAAGC TGTCAAAGAA AACACTTAAG
TCGTCTAAAC TGTCGTCCTC TATCGAAGAG CTTGCAATTC TATACATTCA TATCGGAAAG
TATCAGGAAA CGGAAGATGG TTTAATAAAA TCCATTCAAT TACGAGAAAA ACGTTTTGGT
ATTGATAACA GAAGTTTGAT CAATCCACTG AATCAGATTG GGTTTCTGTA TTTCATTAAA
GGAGATTATG CCCGTGCTGA AAAGTATGCA ACACGCTCCA TGACCATTTG TAAAAATACA
TTCGGTACGA ACTCGATCCG TTATGCAGAA GCAATGAAAC TGTATGCCGA TATACATACA
GCTATTGGTG ATTATAACAC GGCTCAGGTA ACCATATTAA ATGTAATTGA TATTTATAAA
AAATTATATG GCGAAGATCA CATTCAGGTA GCATTGGCCA AAAATGATCT GGCGCTGATC
AAGTATTATA ACAAAGGAGA TAAGAATGAA ATTGAAAAAC TGTTTCTTTC TTCTTTGAAA
ACCATTAAAA CGGAACTGAA TGAAAATACG CCCATTTATG CAGAAGTGTT AAAGAACCTG
TCGCTGTTTT ACCTGGAGAC GGGTAAAGAA GATAAGGCAG ATGTAAATCT GGAAGCCGCA
AATAAAATCT GGGTTGAAAA ATTTGGTACT GCAGACAGAC ATGCGGCAGA TTATAATTAC
CTGAAAGGGT TGATCTATTA CAGAAGAGGC AAATATGTAG ATGCCAATAT GTCTTTCATT
AAATCAAAAG ATATTTATTC TTCTTCATTC AGTACAAGCC ATCCGGATTA TACAAAAGCT
CTTTGTAAAA GCGGACAAAT GTATTTCATC CTGAAAGATT ATGACAACGC TGTTAAGTCG
TACGATGAAG CGATTAAAGG ATACCTGAAT TTTATTTCCG TTCAGTTCCC TGCATTAAGT
GAACGTGAAA AGATGAAAGC CTGGAGTGTA ATTAAAACCG ATTTTGAGTT TTACTATTCA
ATGGCTTATC AATTACGTGC CGACCGTCCG GATCTGATGG GGAATGTGTA CAATATGACC
ATTTCAACAA AAGCATTGAT GCTGAATTCA TCCATTAAAG TGCGTCAGCG CATTTTAAAC
AGCGGAAATC AAAGTATGAT TGATGCGTAT CAAAACTGGA TCGGTAAAAA AGAATATTTT
TCAACCGTAT TGTCCATGAG TAATACGCAG ATTCAGGAAA ACGCCATTAA TAAGGTTGAA
CTTCAAAAGG AGATTGAATC TCTGGAAAAA TATCTTTCTG AATCTTCTGA ATTATTTGCA
CAGAGTTATG AAAGCAAACT GGTATATGAC TGGAAACAGT TGAAAGGTAT GCTGGCTCCG
AATGAAGCGG CCGTTGAGAT GATCCGTTTC AGATACTTTA CAACAAAGTT TACAGATACC
ATTGTGTATG CTGCATTGGT GCTGCATAAA GAAACGAAAA ATTCTCCTGA AATTGTTGCG
ATGACAAACG GTAAGGAAAT GGAAAGCCGT AATGTTAAAT ATTACCGTAA CTGTATGAAG
TTTAATATTG AAGATAAATT TTCATACGAT GTATACTGGA AGAATATTCA GGCTTTGATA
CCCGCAGCCA AAACACGTTT ATATATTTCT CCTGAAGGAG TGTATAATCA GATCAATCTT
GAAACATTAA AAGGGCCGGA TGGAAAATAT CAGCTGGAGA AATATCAGTT TGTGCAGGTT
GCCAATACAA AAGATATCCT GGTGGATGGT TATAAAAAGC AGCGTAAAAC AGCGTCCGGT
GAAACGGCCA CTAAAGTAAA AGAATCAAAC ATTGTACTGG TAGGTAATCC AACGTATTAT
CCGGCTGCGT TGTCGGAAGA TTATGATAAG ACCATACCGC AGCTTCCCGG TGCTGAAAAA
GAAGTAAAAG ATATTAGTGT ATTGCTGAAG CAAAACAATA TTTCATCTGA ACTGATTATG
GAAAGCGCAG CAACAGAAGA TAAAATCAAA TCATTAAAGA GTCCGCGTTT CTTTCACATT
GCCACACACG GTTATTTCCT GCCCGATATT CAGCAGTCTG GTTTTGATTC GGAACTCGAA
AATGAATCTT CACAAAACCC GCTCTATCGT TCAGGTTTAC TCGTTGCGAA TGGCGGTACA
TTATTAAACG ACCCCGACAA TGTTGATTTT AACAGTGAAG ATGGTTTACT GACTGCGTAT
GAAGCAATGA ACCTCGACTT TGATAATACA GAACTTGTTT TGTTAAGTGC CTGTGAAACC
GGTCTGGGTG ATGTACAATT GGGTGAAGGC GTATACGGGT TACAGCGATC GTTTATTGTA
GCAGGTTCTA AAAACCTTGT GATGAGTTTG TTTAAAGTAT CCGATGAAGT AACCGGCGAT
CTGTTAAATC AGTTTTATAC CAATTGGGTA AAAACAGGAA ATAAACGTCA GTCGTTATAC
GATGCCAAAG TATATATTCT GAAAAAATAC CAGCAGCCGA TCTATTGGGG GGCATTTGTA
CTGGTTGGTT TGGATTAA
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| Protein sequence | MTSSGKAGSL VLARAYFLYA KGSELDGNFK AYEEYMFKGD RELQKSSKDD VYQYAKSVNY
AIDTYLSYGD YVNASKYLGD IYGIIAKGGL SDSGLYYDLK KSSVITFYRQ GFYIKAQKGL
TEIIAFRKRN IVTSELKTDP KTGKQKVVKV SGMDLILRKR AYARMLNMQA EMYLDNGNYK
STDSILNLTS EWIKKNVGTK DLCYVENLFY KGRLAETVGT KKEANRLYDL AYNTLLKTKY
GRYRNYSREA IMIFEYLIPT YRVTSQSSDF RTKSEMFDVR VTRYYGKDNY YYSKVIFLEI
QDRFLSEDWN GAVKNIDKIL NKEGMIPKVH LDRAFLLKIL ADAYIELDRY DEAEAAIEQA
TQIKLALLGE ASPNYHMQLL DRATYYVTYT DKFKKAEETY KYSLNQVVSK ELDHQHKQYV
TYLYQEAKLF ELTDRFDEAQ KIAAEATAIV VARYGKLSVN YGTALQTQAN LDISQGNYGD
AELKLAEALA LFKKFATDKD NLEYAKVLET QARLFIIEGL YEDAEKNLKK AYKLSKKTLK
SSKLSSSIEE LAILYIHIGK YQETEDGLIK SIQLREKRFG IDNRSLINPL NQIGFLYFIK
GDYARAEKYA TRSMTICKNT FGTNSIRYAE AMKLYADIHT AIGDYNTAQV TILNVIDIYK
KLYGEDHIQV ALAKNDLALI KYYNKGDKNE IEKLFLSSLK TIKTELNENT PIYAEVLKNL
SLFYLETGKE DKADVNLEAA NKIWVEKFGT ADRHAADYNY LKGLIYYRRG KYVDANMSFI
KSKDIYSSSF STSHPDYTKA LCKSGQMYFI LKDYDNAVKS YDEAIKGYLN FISVQFPALS
EREKMKAWSV IKTDFEFYYS MAYQLRADRP DLMGNVYNMT ISTKALMLNS SIKVRQRILN
SGNQSMIDAY QNWIGKKEYF STVLSMSNTQ IQENAINKVE LQKEIESLEK YLSESSELFA
QSYESKLVYD WKQLKGMLAP NEAAVEMIRF RYFTTKFTDT IVYAALVLHK ETKNSPEIVA
MTNGKEMESR NVKYYRNCMK FNIEDKFSYD VYWKNIQALI PAAKTRLYIS PEGVYNQINL
ETLKGPDGKY QLEKYQFVQV ANTKDILVDG YKKQRKTASG ETATKVKESN IVLVGNPTYY
PAALSEDYDK TIPQLPGAEK EVKDISVLLK QNNISSELIM ESAATEDKIK SLKSPRFFHI
ATHGYFLPDI QQSGFDSELE NESSQNPLYR SGLLVANGGT LLNDPDNVDF NSEDGLLTAY
EAMNLDFDNT ELVLLSACET GLGDVQLGEG VYGLQRSFIV AGSKNLVMSL FKVSDEVTGD
LLNQFYTNWV KTGNKRQSLY DAKVYILKKY QQPIYWGAFV LVGLD
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