Gene CHU_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1212 
Symbol 
ID4184660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1388460 
End bp1389071 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content43% 
IMG OID638071207 
Producthexapeptide repeat-containing protein acetyltransferase 
Protein accessionYP_677825 
Protein GI110637618 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID[TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTAT ATGGTGCCAG TGGCCACTCC AGAGTTGTTA AAGATTGTGT CATGACTTCA 
GGCGGTGAGG TGCATGCAAT ATTTGATGAC AATCAGGATC TGATCAAACT GGATAACATT
CCGGTTGTTG GGTATTATGA CCCGGAATAT GAATCGGCAG AACAGATCAT TGTTACTATT
GGTGACAATC TGATCCGCAA GAAAATTGTT TCTAAAATCA AACATGCTTT CGGTAAAGCA
ATTCACAGCG CTTCTACTGT TTCACCAACA ACCGTTATCG GTGAAGGCAC AGTGGCAATG
CCGGGTTCTA TTGTGAATGC GGGTTCAAGA GTAGGGAAAC ATTGTATCAT TAATTCCAAC
GCTATTGTAG AGCATGATTG TGAATTGGGA GATTTTGTAC ACCTTTCCTC TAATGTGACC
CTGTGTGCTG ATGTAAATAT TGGTGAAGGT ACACACATCG GTGCGGGTTC AACGGTTATT
CCTGGGAAGC AGATCGGCAA GTGGTGTGTG ATCGGGGCGG GTGCTGTAAT CATTCAGGAC
ATCCCTGATT ATTCCATGGT TGTGGGTGTT CCGGGGAAAA TCATTCGTAC ACTTGTTAAG
AAAACGGTAT AA
 
Protein sequence
MLLYGASGHS RVVKDCVMTS GGEVHAIFDD NQDLIKLDNI PVVGYYDPEY ESAEQIIVTI 
GDNLIRKKIV SKIKHAFGKA IHSASTVSPT TVIGEGTVAM PGSIVNAGSR VGKHCIINSN
AIVEHDCELG DFVHLSSNVT LCADVNIGEG THIGAGSTVI PGKQIGKWCV IGAGAVIIQD
IPDYSMVVGV PGKIIRTLVK KTV