| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1210 |
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| Symbol | ispE |
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| ID | 4184658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1386976 |
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| End bp | 1387788 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638071205 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_677823 |
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| Protein GI | 110637616 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.357843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCTCAT TTCCAAATGC CAAGATCAAT CTTGGTTTAT CTGTTTTAAG CAAACGTCCG
GATGGATACC ATAACATTGA AACGTGTTTT TATCCAATCC CGTGGAACGA CATGCTTGAG
ATCATTCCGG CAAAAGAAAC CGTATTTACC AGTTCGGGCA ATAACATACC GGGAACATCT
GCTTCTAATC TGTGCCTTAA GACGTATACC CTGCTGAAAG AAAAGTATCC GCTCTCACCT
GTTCACATTC ACTTGCATAA ACGCATCCCC ATCGGTGCAG GCCTGGGCGG CGGCTCTTCA
GACGCAGCCT TTACCTGTAA GCTTTTAAAC GATGTGTTTG CACTCAAACT TTCTGCCGCA
GAAATGGAAG ATATTGTTCG GCCCGTTGGT AGTGACTGTG CATTTTTTAT TGAAAACACA
TCTATTCTGG CACACGAAAA AGGTGATTAC TTTTCACATC CGGGTATCGT GAATCTAAGT
GGAAAATGGA TTTACCTGAT CCATCCGGGC ATTCATGTGG CAACAAAAGA AGCGTATGAT
GGTGTTGTAC CCAATACAGA CAGAAAACCG ATCGGTGATA TTTTAAAACA ACCATTGAGT
GTCTGGAAAG CAGAACTTGT AAACGATTTT GAACGTAGTG TATTTGAAAA ATATCCGGCT
ATAAAAACCT TAAAAGAACA GATGTACAAA CAGGGTGCAG CATATGCGGC AATGAGTGGC
TCCGGTTCAA CGGTATTCGG TATATTTAAT ACAAAACCGG AAACTTTTCA TGAAAACACA
TCCAACATAC AGAGTTGTAT TGCCCCATTA TAA
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| Protein sequence | MISFPNAKIN LGLSVLSKRP DGYHNIETCF YPIPWNDMLE IIPAKETVFT SSGNNIPGTS
ASNLCLKTYT LLKEKYPLSP VHIHLHKRIP IGAGLGGGSS DAAFTCKLLN DVFALKLSAA
EMEDIVRPVG SDCAFFIENT SILAHEKGDY FSHPGIVNLS GKWIYLIHPG IHVATKEAYD
GVVPNTDRKP IGDILKQPLS VWKAELVNDF ERSVFEKYPA IKTLKEQMYK QGAAYAAMSG
SGSTVFGIFN TKPETFHENT SNIQSCIAPL
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