| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1199 |
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| Symbol | yggB |
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| ID | 4185354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1378826 |
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| End bp | 1379671 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638071196 |
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| Product | mechanosensitive ion channel component |
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| Protein accession | YP_677814 |
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| Protein GI | 110637607 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000786613 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACAAATA CCCATATGCC CGAATTAGCA AAACCTGAAT TTGTTTCAGT AGATCATTTA
AAAAGTGTTA CCGACAGCAT TATTTCATAT CTGCCTACAC TGGCGTATAG TTTAGCCGTT
CTGTTTGTTG GCTTCTGGTT AGCGAAACGA CTGGATAAAG GTTTAGCAAA ATATTTTAAT
AAGCGTAACT ACGATGTTTC GCTGGAAGGT TTTATCCGCA GCCTGGTAAG TGTGGGCCTC
AAGATCATTA TTGTACTTAC GTTTGCCGGT ATGATCGGTT TGCCCACAAC CTCTCTGCTT
GCGGTATTTG GTGCTGCGGG TCTGGCGGTA GGTCTGGCAC TTCAGGGCTC ATTGGCAAAC
TTTGCTGGTG GCGTGTTAAT CCTGATCTTT AAACCGTTCA AAGTAGGCGA TGTAATCAGC
ACACAAGGCG AAACAGGAGA GGTGCAGGAG ATTCAGATCT TCAATACGAT TTTATTGACA
CCGGAAAATA AAACGGTTAT CCTTGCCAAC GGTTCTGTTT CAAACGGAAC AATTGTGAAT
GTAACCCGTC ACGGTAATTT AAGAGCAAGC TTACGTATCG CGATTGATTT TTCAGAAGAT
CTAGACCATG TACGAAGCAT TATCATGGGT GTATTACAGA ATGAACCCCT GGTTCTAAAA
ACACCAGAGC CGTCTGTAAT TGTAGTAGAA TATGCAGAAA GCGCAATTGT ATTATCCGTA
AGACCGTATG CAAATGTAGC TGATTTTGGT CCGATGCAGA CAGCCGTATA CGAAAAGATC
CGCAAGGAAT TCATCGCACA CGAAGTTAAA AGCCCGGAAA TCAAACGCAC ATACGTACAA
CCGTAG
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| Protein sequence | MTNTHMPELA KPEFVSVDHL KSVTDSIISY LPTLAYSLAV LFVGFWLAKR LDKGLAKYFN
KRNYDVSLEG FIRSLVSVGL KIIIVLTFAG MIGLPTTSLL AVFGAAGLAV GLALQGSLAN
FAGGVLILIF KPFKVGDVIS TQGETGEVQE IQIFNTILLT PENKTVILAN GSVSNGTIVN
VTRHGNLRAS LRIAIDFSED LDHVRSIIMG VLQNEPLVLK TPEPSVIVVE YAESAIVLSV
RPYANVADFG PMQTAVYEKI RKEFIAHEVK SPEIKRTYVQ P
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