Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1190 |
Symbol | |
ID | 4185345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1364243 |
End bp | 1364743 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638071187 |
Product | nuclease |
Protein accession | YP_677805 |
Protein GI | 110637598 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0870678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0174729 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGA TTATTTTCAT TCTGTCCACG CTACTCTTAA TGAGTACTGC CTATTCTCAA CAACCTGCGC GAATTACCCG CATAAAAGAT GGTGATACAT TTGTAGCGGT ATGGAAACAC CGATCCTACA CGTGCCGCCT TGCTTCTATT GATGCACCGG AACTTTCACA AACCTACGGA TACGAATCGT ACCAAGCGCT AAGTAAAATA GTAGCAGGCA AAAAAATCCT GATTACCGCA CACACAAGAG ACTTGTATGG ACGCGTGCTT GTTAATGCAT ATGTTGATGG CAAGAGACTG GACAGCCTAC TTATCAGAAA GGGTTATGCC TGGCACTATT CTACTTATTC TCATGAGGCA ATGTTAAAAC AATGTATGCA GGATGCCATA CTAGATAAAG CAGGCCTCTG GCATTGCGGA AAAGACTCGG TTTGTCCGCC GTGGTTATTC AGAAATTATA ACTACCCGAA CAAACAAAAA TATTGCATGG GCTGCAACTA A
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Protein sequence | MKQIIFILST LLLMSTAYSQ QPARITRIKD GDTFVAVWKH RSYTCRLASI DAPELSQTYG YESYQALSKI VAGKKILITA HTRDLYGRVL VNAYVDGKRL DSLLIRKGYA WHYSTYSHEA MLKQCMQDAI LDKAGLWHCG KDSVCPPWLF RNYNYPNKQK YCMGCN
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