Gene CHU_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1190 
Symbol 
ID4185345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1364243 
End bp1364743 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content43% 
IMG OID638071187 
Productnuclease 
Protein accessionYP_677805 
Protein GI110637598 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0870678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0174729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA TTATTTTCAT TCTGTCCACG CTACTCTTAA TGAGTACTGC CTATTCTCAA 
CAACCTGCGC GAATTACCCG CATAAAAGAT GGTGATACAT TTGTAGCGGT ATGGAAACAC
CGATCCTACA CGTGCCGCCT TGCTTCTATT GATGCACCGG AACTTTCACA AACCTACGGA
TACGAATCGT ACCAAGCGCT AAGTAAAATA GTAGCAGGCA AAAAAATCCT GATTACCGCA
CACACAAGAG ACTTGTATGG ACGCGTGCTT GTTAATGCAT ATGTTGATGG CAAGAGACTG
GACAGCCTAC TTATCAGAAA GGGTTATGCC TGGCACTATT CTACTTATTC TCATGAGGCA
ATGTTAAAAC AATGTATGCA GGATGCCATA CTAGATAAAG CAGGCCTCTG GCATTGCGGA
AAAGACTCGG TTTGTCCGCC GTGGTTATTC AGAAATTATA ACTACCCGAA CAAACAAAAA
TATTGCATGG GCTGCAACTA A
 
Protein sequence
MKQIIFILST LLLMSTAYSQ QPARITRIKD GDTFVAVWKH RSYTCRLASI DAPELSQTYG 
YESYQALSKI VAGKKILITA HTRDLYGRVL VNAYVDGKRL DSLLIRKGYA WHYSTYSHEA
MLKQCMQDAI LDKAGLWHCG KDSVCPPWLF RNYNYPNKQK YCMGCN